Detailed information of BRAKERKYLP00000025218.1 in Mastigias papua

Genomic Location: not available for this species
NR annotation: CAH3147166.1, unnamed protein product [Porites evermanni]
Species Mastigias papua · all data for this species · gene families

 Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
O70157DNA topoisomerase 3-alpha OS=Mus musculus OX=10090 GN=Top3a PE=2 SV=1
Q13472DNA topoisomerase 3-alpha OS=Homo sapiens OX=9606 GN=TOP3A PE=1 SV=1
C7J0A2DNA topoisomerase 3-alpha OS=Oryza sativa subsp. japonica OX=39947 GN=TOP3A PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003263 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01396
all species →		zf-C4_TopoisomTopoisomerase DNA binding C4 zinc fingerDomainInterproscan
PF01131
all species →		Topoisom_bacDNA topoisomeraseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR023405
all species →		Homologous_superfamilyDNA topoisomerase, type IA, core domainInterproscan
IPR013498
all species →		DomainDNA topoisomerase, type IA, zn fingerInterproscan
IPR013497
all species →		DomainDNA topoisomerase, type IA, centralInterproscan
IPR013824
all species →		Homologous_superfamilyDNA topoisomerase, type IA, central region, subdomain 1Interproscan
IPR000380
all species →		FamilyDNA topoisomerase, type IAInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11390
all species →		PROKARYOTIC DNA TOPOISOMERASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003677
all species →		Molecular FunctionDNA bindingInterproscan
GO:0003916
all species →		Molecular FunctionDNA topoisomerase activityInterproscan
GO:0005694
all species →		Cellular ComponentchromosomeInterproscan
GO:0006265
all species →		Biological ProcessDNA topological changeInterproscan
GO:0003917
all species →		Molecular FunctionDNA topoisomerase type I (single strand cut, ATP-independent) activityInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for BRAKERKYLP00000025218.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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