Gene detail

Detailed information of BRAKERKYLP00000025391.1 in Mastigias papua

Genomic Location: not available for this species
NR annotation: XP_034305822.1, cyclin-D-binding Myb-like transcription factor 1 isoform X2 [Crassostrea gigas]
Species Mastigias papua · all data for this species · gene families

Sequence

CDS

BRAKERKYLT00000025391

atgaaaaatgaaatagtggCAAATGATGTTGGAATCAAAGCTCATGATGGAAAACGAGAGGACATGAGTATTTCTTCAATACTGACAGAGCAGAACCAAAAGTCAGTTAACTCTGACAATATTTTGATGGAGACAGAAATGGTAGTAAAGAaacagagaaagaaaaagaagaaacacaAAAGTAGCCATGGGGATGAAAAGATATTTGAAGGTGAAAATCATCTCAATTTCATACAGAAAAAGACAATACGTGGCAATGAAGTTAAGAACTATGTTGCAAAACAGGAAAAAAAGTTACATAAAATCAGTCATAGAGATGAAGCAACATTTGAAGAAGGAGCTGATCTCAATTTGATAAAGGAAGggaaaataaatgatgatgaagttgcAAACCATGTtgagaaaaagaaacagagaaagAAGCATAAAAGGATTCATGGAGATGAAGCAACATTTGAAGAAGGATCTCATCTCAGTTTGATAAAggaagagaaaataaatgatgatgaagttgcACACCATGTCGAGAAGAAGAACAAGAGGAAGAAGCATAAAAGCAGTCATGGAGATGAAGCAACATTTGGAGAAGGAGCTCATCTCATTTTGATAAAGgaagataaaataaatgatgatgaagttgcACACCATgtcgagaagaagaagaaaaggaagaaacaTAAAAGCAGTCAAGGAGATGAAGCAATGTTTAAGGATGGAGTTAATCTCAATTTTATGAATGAAGAGacaataaatgatgatgaagttgcCCACCTTAttaagaagaaaaagaaaagaaagaagcatAAAAGCATTCATGGAGATGAAGCAGCTTTTACCAATGGGACTAATCTCAGTTGtataaaggaagaaaaagtaAGTGATGGTGAAATTGCACACATTTTTGGGAaggagaagaagaggaagaagcaTAAAAGAAATCATGTAGATGAAGCAACATTTGAAGAAGGAGCTCATCTCAATTTTCTTAAggaagaaaaaataaatgatgGTGAAGTTGCACACCTTgttgagaagaaaaagaaaaagaagaaacataAAAGCAGTCATGGAAATGAAGCACCATTTAGAGATGGGGTTGATCTCAATTTTGTAACAGAAGAgaaaataagtgatgataaaaTTACTAACTATtctcagaaaaagaaaaagaaaaaatataaaagcAGCCATGGGGATGGCAGGGCAGCTGAGGGTGCATTCAAACTAAATtttatagagaaagagaaaatatatagtgaTGACATTGCAAACCATGttgagaaaaagaagaagaagcacAAAAGCTCATTAGTTGATGATGTAGTAATAAACAGTGTTCCAGGAGGTTATATAGGTGATACTAGACAAAGCAATAGTGCAACAATTATGAGTGAAATTAATGAGGTGGTAGCAGAGAAGAAAGGGATGAGGAATAAAAAACTTACTATGACTGGTAGAAGCAATTGTGTGACAAATGGAAGAGAAGGGGATGGAGTATCTTTGTTGCAGACTACTAGATTAACTGACAATATCATGAAAAAGAGTAAGGAGAATGAAAGTGCTTCTACAGAAGCAGATAAAAATTCATGTGAAATATCAACAAGGAAAGTACTGAATAATGATGAATTAATGGTCATGCACACTGCTCCAAAGAAAAACTATGCATCTATAACTAAACAGGGTAAAAAAAGAAAGCACTGTGAATCTGATGGGAGCATATCACTAGAAGCAGAAGACACAGAATCTGGTGAAACTATGAAGAAGAAAAAGTTAAACCATATTAATATGCATATGGGTGGTGTGCAAGACTGTCAAAATTCTTACCATAGTACtaagaagaagatgaaagaGGTGAAGGAAAAGCTATATGATGCTAGACAAACGGATGTTGGATTTGACTGCAAAATTACAGAGAACAAAGGAGTCCATAGCCATGTTGTATCAGACAGGGCAAAGAACAGATATATTATTTGTCCCTCTCTGCATAAAACAGATAGCACAGCAAGCCAAAAGAAAGGACAAGTACACAGAAAAAGAGTTGAAGATTCTAAGGAGCATATGATAAAGGAAAATGATAGCACAGTTGTAGCCATTGAAGAACCTAGTAATGAACTTGAAGACCAGATGATATGTGATGTCAATGATAGCTCCAGTCCAGATGCTAGTGAGCAAGAAATGCAAAGTCATGATGCACAAGTAGTAGAGATCTGTAAAGACAGTAGAATTATATCaaagaataaaaacaaacttGTTGAAGAAAATTACAATGAGACCAGGCCTTCCAAAGTAAGTGATGACTTACCAGAAGGAAGGAGGAGTAGTGCAGACTATAATAGTATGAAATGTGAAGAAAGGATAACACCAATAGGAGTTGATAATTTCCATAGCAGTGGGCATAAAACATCTGTGAAAATGAATGGATTTAACATGGGGGACAATGACAAGCACCAGAAGAAAGGCAATGAAATTCTTTCTGATACTGTTAAGTTTTCTGACCCAGTATTATTGAGAAAGCCTGAAAAGTTGAAAGCTAGAAATCAAACTTCTGAGGATAGGCATTATCACCTTAAATGGTGCTTGACAGCTGAAGATAAGGAAGAACTCAAAAGGCAAGGAATTGAATTTGAACAGGGAAGGTGGAGGgaagaagaaattaagaaacttgaaGACAATTATCAGAGTGTTATGATGCAAACAGGATTGTCAAATGAAGATCTTATCAAATTGATTAAGGACAAAAGCAGTGaagcaaaaaggaaaagaatggaTCTTGGTATCTATCACACCCTTCTAGAAGGCATAAATCGACCAATCAGGCTGGTTCATCAAAAGCTAAAGAAAATCATTGATCCAACTCATTTTAAGGGTAAATGGTTGAAATCAGAAGAGGAAATTTTGCTGCAACTCTTTAAGAGGCATGGACATGACTGGGCCAGGATTAGCCAGTTTATGGATCGGAGCAGGGATTCAATAATACATAAAATTCAGCGTTTACTATGCGGTCCTCTGTCCCAGAGTGCACCAAGGGTTCAGAATAGAAAAAAATGGGCATCAGATGAATTGGAAAGACTGACAAATGCAATAGATAAGATAGCACAATGTGGAACTGGTAGTAGAAATGAGAGAAAGAAAGTTGATCCCAAACAGATTAGCCCTAAGCATATTGATTGGAACAGTGTATCAAGCGTTGTCAGAACACGTAGTGCTGAGTCATGTAGGTTTAAATGGGTTTTTGACCTGTCATTAAGAGGGCCTGGAGCTGAGAAGAAGAGTTGGACAACAGAGCAAAATCTGGCATTTCTTGAAGCATTAAGCAAGTGCGATAAGGAAAATGAGATGGATGTTGATTGGGCACAAATTTTGAAGGATTTGGAGCTGCCTGGGACTGTGCTTGTTGCTAAAAGAAAGTGGAGAACCTACAAGTTTACTGTCCCACATTATAAGCAGTTGAGTTTCGAACAGCAACTGAAGTGGTTAACTCTTAATTTTATCAAGAAGATGCGTGAGAAAAGGCAATACACAGAAGTCGTCTATGAAAGATAG

Transcript

BRAKERKYLT00000025391

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001368 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00249 all species →	Myb_DNA-binding	Myb-like DNA-binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001005 all species →	Domain	SANT/Myb domain	Interproscan
IPR017930 all species →	Domain	Myb domain	Interproscan
IPR053078 all species →	Family	Transcription Termination Factor 1-like	Interproscan
IPR009057 all species →	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46760 all species →	TRANSCRIPTION TERMINATION FACTOR 1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003682 all species →	Molecular Function	chromatin binding	Interproscan
GO:0005730 all species →	Cellular Component	nucleolus	Interproscan
GO:0006363 all species →	Biological Process	termination of RNA polymerase I transcription	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERKYLP00000025391.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.