Detailed information of BRAKERKYLP00000026133.1 in Mastigias papua

Genomic Location: not available for this species
NR annotation: XP_047132275.1, DNA topoisomerase 3-alpha isoform X2 [Hydra vulgaris]
Species Mastigias papua · all data for this species · gene families

 Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
O70157DNA topoisomerase 3-alpha OS=Mus musculus OX=10090 GN=Top3a PE=2 SV=1
Q13472DNA topoisomerase 3-alpha OS=Homo sapiens OX=9606 GN=TOP3A PE=1 SV=1
Q9NG98DNA topoisomerase 3-alpha OS=Drosophila melanogaster OX=7227 GN=Top3alpha PE=2 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003263 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01751
all species →		ToprimToprim domainFamilyInterproscan
PF01131
all species →		Topoisom_bacDNA topoisomeraseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR034144
all species →		DomainDNA topoisomerase 3-like, TOPRIM domainInterproscan
IPR013497
all species →		DomainDNA topoisomerase, type IA, centralInterproscan
IPR006171
all species →		DomainTOPRIM domainInterproscan
IPR023406
all species →		Active_siteDNA topoisomerase, type IA, active siteInterproscan
IPR023405
all species →		Homologous_superfamilyDNA topoisomerase, type IA, core domainInterproscan
IPR013826
all species →		Homologous_superfamilyDNA topoisomerase, type IA, central region, subdomain 3Interproscan
IPR003602
all species →		DomainDNA topoisomerase, type IA, DNA-binding domainInterproscan
IPR000380
all species →		FamilyDNA topoisomerase, type IAInterproscan
IPR003601
all species →		DomainDNA topoisomerase, type IA, domain 2Interproscan
IPR013824
all species →		Homologous_superfamilyDNA topoisomerase, type IA, central region, subdomain 1Interproscan
IPR013825
all species →		Homologous_superfamilyDNA topoisomerase, type IA, central region, subdomain 2Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11390
all species →		PROKARYOTIC DNA TOPOISOMERASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003677
all species →		Molecular FunctionDNA bindingInterproscan
GO:0003916
all species →		Molecular FunctionDNA topoisomerase activityInterproscan
GO:0006265
all species →		Biological ProcessDNA topological changeInterproscan
GO:0003917
all species →		Molecular FunctionDNA topoisomerase type I (single strand cut, ATP-independent) activityInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for BRAKERKYLP00000026133.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP