Detailed information of BRAKERKYLP00000026260.1 in Mastigias papua

Genomic Location: not available for this species
NR annotation: CAB3985626.1, DNA ligase 1-like isoform X1 [Paramuricea clavata]
Species Mastigias papua · all data for this species · gene families

 Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q27474DNA ligase 1 OS=Caenorhabditis elegans OX=6239 GN=lig-1 PE=3 SV=2
P04819DNA ligase 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=CDC9 PE=1 SV=2
P51892DNA ligase 1 OS=Xenopus laevis OX=8355 GN=lig1 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003742 (this species only)

 Pfam domain
No Pfam domain signature was detected for BRAKERKYLP00000026260.1. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR050191
all species →		FamilyATP-dependent DNA ligaseInterproscan
IPR036599
all species →		Homologous_superfamilyDNA ligase, ATP-dependent, N-terminal domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45674
all species →		DNA LIGASE 1/3 FAMILY MEMBERInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003910
all species →		Molecular FunctionDNA ligase (ATP) activityInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0005739
all species →		Cellular ComponentmitochondrionInterproscan
GO:0006266
all species →		Biological ProcessDNA ligationInterproscan
GO:0006273
all species →		Biological Processlagging strand elongationInterproscan
GO:1903461
all species →		Biological ProcessOkazaki fragment processing involved in mitotic DNA replicationInterproscan
GO:0003677
all species →		Molecular FunctionDNA bindingInterproscan
GO:0006281
all species →		Biological ProcessDNA repairInterproscan
GO:0006310
all species →		Biological ProcessDNA recombinationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for BRAKERKYLP00000026260.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP