Gene detail

Detailed information of BRAKERKYLP00000026430.1 in Mastigias papua

Genomic Location: not available for this species
NR annotation: MBM3386640.1, Fe-S cluster assembly scaffold IscU [Betaproteobacteria bacterium]
Species Mastigias papua · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P0ACD6	Iron-sulfur cluster assembly scaffold protein IscU OS=Escherichia coli O157:H7 OX=83334 GN=iscU PE=1 SV=1
P0ACD5	Iron-sulfur cluster assembly scaffold protein IscU OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) OX=199310 GN=iscU PE=3 SV=1
P0ACD4	Iron-sulfur cluster assembly scaffold protein IscU OS=Escherichia coli (strain K12) OX=83333 GN=iscU PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007703 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01592 all species →	NifU_N	NifU-like N terminal domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002871 all species →	Domain	NIF system FeS cluster assembly, NifU, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10093 all species →	IRON-SULFUR CLUSTER ASSEMBLY ENZYME NIFU HOMOLOG	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005506 all species →	Molecular Function	iron ion binding	Interproscan
GO:0016226 all species →	Biological Process	iron-sulfur cluster assembly	Interproscan
GO:0051536 all species →	Molecular Function	iron-sulfur cluster binding	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0006879 all species →	Biological Process	intracellular iron ion homeostasis	Interproscan
GO:0008198 all species →	Molecular Function	ferrous iron binding	Interproscan
GO:0051537 all species →	Molecular Function	2 iron, 2 sulfur cluster binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERKYLP00000026430.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.