Genomic Location: not available for this species
NR annotation: NBQ17529.1, hypothetical protein [bacterium]
Species Mastigias papua · all data for this species · gene families
| CDS |
| BRAKERKYLT00000026498 |
| Transcript |
| BRAKERKYLT00000026498 |
| Protein |
| BRAKERKYLP00000026498.1 |
| UniProt accession | Description |
|---|---|
| Q5UPZ0 | DNA ligase OS=Acanthamoeba polyphaga mimivirus OX=212035 GN=MIMI_R303 PE=1 SV=1 |
| Q27958 | DNA polymerase beta OS=Bos taurus OX=9913 GN=POLB PE=2 SV=3 |
| P06766 | DNA polymerase beta OS=Rattus norvegicus OX=10116 GN=Polb PE=1 SV=4 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0001983 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF14792 all species → | DNA_pol_B_palm | DNA polymerase beta palm | Domain | Interproscan |
| PF14791 all species → | DNA_pol_B_thumb | DNA polymerase beta thumb | Family | Interproscan |
| PF10391 all species → | DNA_pol_lambd_f | Fingers domain of DNA polymerase lambda | Domain | Interproscan |
| PF01653 all species → | DNA_ligase_aden | NAD-dependent DNA ligase adenylation domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR022312 all species → | Family | DNA polymerase family X | Interproscan |
| IPR027421 all species → | Homologous_superfamily | DNA polymerase lambda lyase domain superfamily | Interproscan |
| IPR002054 all species → | Domain | DNA-directed DNA polymerase X | Interproscan |
| IPR043519 all species → | Homologous_superfamily | Nucleotidyltransferase superfamily | Interproscan |
| IPR028207 all species → | Domain | DNA polymerase beta, palm domain | Interproscan |
| IPR002008 all species → | Family | DNA polymerase family X, beta-like | Interproscan |
| IPR037160 all species → | Homologous_superfamily | DNA polymerase, thumb domain superfamily | Interproscan |
| IPR029398 all species → | Domain | DNA polymerase beta, thumb domain | Interproscan |
| IPR018944 all species → | Domain | DNA polymerase lambda, fingers domain | Interproscan |
| IPR013840 all species → | Domain | NAD-dependent DNA ligase, N-terminal | Interproscan |
| IPR013839 all species → | Domain | NAD-dependent DNA ligase, adenylation | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11276 all species → | DNA POLYMERASE TYPE-X FAMILY MEMBER | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0003677 all species → | Molecular Function | DNA binding | Interproscan |
| GO:0003887 all species → | Molecular Function | DNA-directed DNA polymerase activity | Interproscan |
| GO:0006281 all species → | Biological Process | DNA repair | Interproscan |
| GO:0006303 all species → | Biological Process | double-strand break repair via nonhomologous end joining | Interproscan |
| GO:0034061 all species → | Molecular Function | DNA polymerase activity | Interproscan |
| GO:0003911 all species → | Molecular Function | DNA ligase (NAD+) activity | Interproscan |
BRAKERKYLP00000026498.1.
