Detailed information of BRAKERKYLP00000026498.1 in Mastigias papua

Genomic Location: :...
NR annotation: NBQ17529.1, hypothetical protein [bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5UPZ0DNA ligase OS=Acanthamoeba polyphaga mimivirus OX=212035 GN=MIMI_R303 PE=1 SV=1
Q27958DNA polymerase beta OS=Bos taurus OX=9913 GN=POLB PE=2 SV=3
P06766DNA polymerase beta OS=Rattus norvegicus OX=10116 GN=Polb PE=1 SV=4

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF14792DNA_pol_B_palmDNA polymerase beta palm DomainInterproscan
PF14791DNA_pol_B_thumbDNA polymerase beta thumb FamilyInterproscan
PF10391DNA_pol_lambd_fFingers domain of DNA polymerase lambdaDomainInterproscan
PF01653DNA_ligase_adenNAD-dependent DNA ligase adenylation domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR022312FamilyDNA polymerase family XInterproscan
IPR027421Homologous_superfamilyDNA polymerase lambda lyase domain superfamilyInterproscan
IPR002054DomainDNA-directed DNA polymerase XInterproscan
IPR043519Homologous_superfamilyNucleotidyltransferase superfamilyInterproscan
IPR028207DomainDNA polymerase beta, palm domainInterproscan
IPR002008FamilyDNA polymerase family X, beta-likeInterproscan
IPR037160Homologous_superfamilyDNA polymerase, thumb domain superfamilyInterproscan
IPR029398DomainDNA polymerase beta, thumb domainInterproscan
IPR018944DomainDNA polymerase lambda, fingers domainInterproscan
IPR013840DomainNAD-dependent DNA ligase, N-terminalInterproscan
IPR013839DomainNAD-dependent DNA ligase, adenylationInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11276DNA POLYMERASE TYPE-X FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003887Molecular FunctionDNA-directed DNA polymerase activityInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0006303Biological Processdouble-strand break repair via nonhomologous end joiningInterproscan
GO:0034061Molecular FunctionDNA polymerase activityInterproscan
GO:0003911Molecular FunctionDNA ligase (NAD+) activityInterproscan

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