Gene detail

Detailed information of BRAKERKYLP00000026501.1 in Mastigias papua

Genomic Location: not available for this species
NR annotation: RZD41019.1, hypothetical protein CXT73_05720 [Euryarchaeota archaeon]
Species Mastigias papua · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q99297	Mitochondrial 2-oxodicarboxylate carrier 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=ODC2 PE=1 SV=1
Q54DU1	Mitochondrial substrate carrier family protein P OS=Dictyostelium discoideum OX=44689 GN=mcfP PE=3 SV=1
Q86AV5	Mitochondrial substrate carrier family protein X OS=Dictyostelium discoideum OX=44689 GN=mcfX PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004905 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00075 all species →	RNase_H	RNase H	Domain	Interproscan
PF18974 all species →	DUF5710	Domain of unknown function (DUF5710)	Domain	Interproscan
PF00153 all species →	Mito_carr	Mitochondrial carrier protein	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002156 all species →	Domain	Ribonuclease H domain	Interproscan
IPR012337 all species →	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR050092 all species →	Family	Ribonuclease H	Interproscan
IPR023395 all species →	Homologous_superfamily	Mitochondrial carrier domain superfamily	Interproscan
IPR018108 all species →	Repeat	Mitochondrial substrate/solute carrier	Interproscan
IPR036397 all species →	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR043764 all species →	Domain	Domain of unknown function DUF5710	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10642 all species →	RIBONUCLEASE H1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan
GO:0004523 all species →	Molecular Function	RNA-DNA hybrid ribonuclease activity	Interproscan
GO:0043137 all species →	Biological Process	DNA replication, removal of RNA primer	Interproscan
GO:0090502 all species →	Biological Process	obsolete RNA phosphodiester bond hydrolysis, endonucleolytic	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERKYLP00000026501.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.