Detailed information of BRAKERKYLP00000026750.1 in Mastigias papua

Genomic Location: :...
NR annotation: NQX84171.1, tRNA uridine(34) 5-carboxymethylaminomethyl modification radical SAM/GNAT enzyme Elp3 [Mycoplasmataceae bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
D5VRB9tRNA uridine(34) acetyltransferase OS=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) OX=573063 GN=Metin_0452 PE=1 SV=1
Q58536tRNA uridine(34) acetyltransferase OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) OX=243232 GN=MJ1136 PE=3 SV=1
Q5RIC0Elongator complex protein 3 OS=Danio rerio OX=7955 GN=elp3 PE=2 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04055Radical_SAMRadical SAM superfamilyDomainInterproscan
PF16199Radical_SAM_CRadical_SAM C-terminal domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006638DomainElp3/MiaA/NifB-like, radical SAM core domainInterproscan
IPR007197DomainRadical SAMInterproscan
IPR023404Homologous_superfamilyRadical SAM, alpha/beta horseshoeInterproscan
IPR039661FamilyELP3/YhcCInterproscan
IPR032432DomainRadical SAM, C-terminal extensionInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11135HISTONE ACETYLTRANSFERASE-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0051536Molecular Functioniron-sulfur cluster bindingInterproscan
GO:0002926Biological ProcesstRNA wobble base 5-methoxycarbonylmethyl-2-thiouridinylationInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0033588Cellular Componentelongator holoenzyme complexInterproscan

TOP