Gene detail

Detailed information of BRAKERLUSP00000001912.1 in Blastomussa wellsi

Genomic Location: not available for this species
NR annotation: XP_020612625.1, DNA repair protein XRCC4-like isoform X1 [Orbicella faveolata]
Species Blastomussa wellsi · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q924T3	DNA repair protein XRCC4 OS=Mus musculus OX=10090 GN=Xrcc4 PE=1 SV=1
Q13426	DNA repair protein XRCC4 OS=Homo sapiens OX=9606 GN=XRCC4 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006671 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF06632 all species →	XRCC4	DNA double-strand break repair and V(D)J recombination protein XRCC4	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR038051 all species →	Homologous_superfamily	XRCC4-like, N-terminal domain superfamily	Interproscan
IPR009089 all species →	Homologous_superfamily	XRCC4, N-terminal domain superfamily	Interproscan
IPR010585 all species →	Family	DNA repair protein XRCC4	Interproscan
IPR014751 all species →	Homologous_superfamily	DNA repair protein XRCC4-like, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR28559 all species →	DNA REPAIR PROTEIN XRCC4	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003677 all species →	Molecular Function	DNA binding	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0006302 all species →	Biological Process	double-strand break repair	Interproscan
GO:0006310 all species →	Biological Process	DNA recombination	Interproscan
GO:0005958 all species →	Cellular Component	DNA-dependent protein kinase-DNA ligase 4 complex	Interproscan
GO:0006303 all species →	Biological Process	double-strand break repair via nonhomologous end joining	Interproscan
GO:0010165 all species →	Biological Process	response to X-ray	Interproscan
GO:0032807 all species →	Cellular Component	DNA ligase IV complex	Interproscan
GO:0051103 all species →	Biological Process	DNA ligation involved in DNA repair	Interproscan
GO:0051351 all species →	Biological Process	positive regulation of ligase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERLUSP00000001912.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.