Detailed information of BRAKERLUSP00000010026.1 in Blastomussa wellsi

Genomic Location: chr13:4940875...4949846
NR annotation: XP_020604978.1, basement membrane-specific heparan sulfate proteoglycan core protein-like [Orbicella faveolata]
Species Blastomussa wellsi · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0008833 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13927
all species →		Ig_3Immunoglobulin domainDomainInterproscan
PF00059
all species →		Lectin_CLectin C-type domainDomainInterproscan
PF00041
all species →		fn3Fibronectin type III domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013783
all species →		Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR007110
all species →		DomainImmunoglobulin-like domainInterproscan
IPR001304
all species →		DomainC-type lectin-likeInterproscan
IPR036179
all species →		Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR003961
all species →		DomainFibronectin type IIIInterproscan
IPR003598
all species →		DomainImmunoglobulin subtype 2Interproscan
IPR016186
all species →		Homologous_superfamilyC-type lectin-like/link domain superfamilyInterproscan
IPR016187
all species →		Homologous_superfamilyC-type lectin foldInterproscan
IPR036116
all species →		Homologous_superfamilyFibronectin type III superfamilyInterproscan
IPR003599
all species →		DomainImmunoglobulin subtypeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46013
all species →		VASCULAR CELL ADHESION MOLECULE 1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for BRAKERLUSP00000010026.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP