Gene detail

Detailed information of BRAKERLUSP00000010434.1 in Blastomussa wellsi

Genomic Location: not available for this species
NR annotation: KAJ7369746.1, Protein zgrf1 [Desmophyllum pertusum]
Species Blastomussa wellsi · all data for this species · gene families

Sequence

CDS

BRAKERLUST00000010434

ATGTCTTGCGAAAAGTTTACGGTACTTTACACACATCAGAAGACAAAAAAGGCCAAGACATGGCAGGATGGCATTTTGAAGGTGACAGGATCCAAGGCAGTGCTTTACGATGAGGAGTTAAAAACTCTGGATTCTCTCTTTGTACGGAAAGACAAGGTGGCCGCAGGGGAAGAGTTAGAGAGTGAACGATACCTAATAACTATTGAGGAAAGGCTGCACGCCCCATCTGACCACAACCATGAGGTCAGCTCAAGCACGCAGGAAGAAGAACTTAAAGACTCTGTAGGATCATATTATAAAACAGGCAAGAGGAAAAGACAGTGTTTCCAGCCACCAACATTTAACCAAAAGAAACCCATGATTACTGCTTCGACTGAACCCGAGGTCAAAAAGCCAAGGGAAGATAACTTTATTCCAAGTCAAAGCAGGTTGGGTTTGCCAAACAAACCTCCAAGCAAAACCGACTTTTTCAATATGTACAATTCTCATTCCAACAAACGGGAGAGTAGCAGTTATCAAATCACTCAGAGGACGGGAGCTCGTAATGAAAACCCTGCTGTTTTACAGGCACCAAATAGATCATTTGCTGCTTTCACAGCACTGGAAGAACAGCATGATCATCGCGTCCCCTTCAATATGATTGACGACTGTAGCGCTACAGGAAAAGAGAATCGATTCCCCTCTAGAGGTGGATTGTCCTGTTCCAGCCTTCCTTTACAAAGCGAAATGATTTGCGATGCCGAACATAAGCGTAGCACATCGCAGATTCTAGCATTGTTCTCTTCCCGTCAAAATATACCGCAGCGTAAAATGCCATTTGATAGGCAAACCGAAAAAGTGAGTGAAACAAATCCTGGCACGATGATGGACAAACAATTATGTATTTGGAATAAAACTGTGGAAAGAATTTCGTCTGAGGTGGATGCAGCAAAATTCAGTTCCCAGGCAACCATTTCTCAAACCGCAGATATGCCGCAGCAAGATATTTTGGACAATGGGTCTCTTGGCAAATTTCTAGGATCAGGCGAGGACAGTTTATCTGACTCCCTAAACTTGTCGCCAGATTCCTTTGCAGCTTGTTCTAGTGAGACAAAAACAGAGAGTTCCTTTCTTCGAGGTTTTGATTCAAAGGAAACCGCGTACGACTGTGGTGATGGCAGGGGAGCTGTGATATGCGAAGATGCCACACAAGAATCGGCATTGAGCAGGTCACCTCATCACAGTCAGGGACAAAACGAGGGTTGGTCCCAGGATGATTCCGAGTCCGTTTCACCCCTGATGAGATTCCTGACAGGAGAGAAAAGAGATTGTACTGGAGGTGACCCTAAACCTTGTATTGATGGGAAGGAGGACGGAAAGCAGTCTTGCATCGTAGAACGAAAAAATGACCAGTTCGGTCAACCCAACTTGGAGAGCCCTGGTTCAGCTATAATGAAAAATTCTTTTCCACTTTTGTATTCAGCTCAATCCCCTAAGACGAAATCAACACAGCAATCTTCAAACGGCCTTCCAAAATCAACGCTAAAAGACCTCAGCTGTCTTGATTCTGGTCAAGCCAACTCTTTGTTAGAACGAAATATTTTATCTTGCAGTTCTGGCATTATCTCGCCTTCAATTTCAAAGGAACATGTTTGTGTAAGTTTTAGAGGTATGCTTACTGCTCAACCAAAAGAAGATCGTCTCAACATCAATGGAAATAGGTTTTCCAACCATCCAGGGTCTTTGTTTGCATACAGTGAACTGCAAAGTCATGATCATAACAATACCTTGAAAAATTATTCAGACTCGCTTACGTTTAGAAAAGGGTTCAGTGGTTTTGAGAAGTGGGAGCCATCTTTTGGAGAGAACATTATAGAGGACAGTGGAAAGAATTTACTGCAGTGCGACATCTCACCAGAGTTCTACCCATCAGAAACTGGAAAAATGACTCAGTGGAGAGTTGCTCCTATTGTGACAACGAAAGTCATGCCGACAGACAGCCGGGCGGTGACTGCAGGAGATGGTCACTCGTGGAAAGGTTCAGTTGTCAGTGACACTGTCAAGAGGGGGAGATCGTCTGTACCAATGGTATCAATTCAAAGGGAAGATGTCCACATTCAACCTAGCAATGGTGACCAAAGAACTCCATCTTCGGACCTGACCTGGATTGATTCAATTTCATCAACTGATGCTCATAGCGGCTCGACTTCTCTGCTATCCACTCGCGGATTTGCTACGAGTGAAAGCATTGCGCTCTCATCCACTCGGGGGTTCATTGGGGATAGCCATCTACCAGGGGAAGACGTCACAGAAATTAAACCCGAGTTTGTACAGAGAGTACCTCAGCTGTCCAGGAGAGCCCCCTTAGTTACTGCTCCGCCTGACGATGTAGACACGCAGCTAACAGTTTTCCAAAAGTCGGTCGTTTGCAATGGCCCGTCGACTGGTACATGTTCTAAGGATCTTCCCGGATTTTATTCCCAAACAACGGAGACGACAGAATTGCGGGAGCTCGGACTGTCCCACGGAGAAATCATTCAACCTTTGGAAGTGGCGGGTGGAATTTTTACCGAGCAAAGACAGAACCCGGGGCATTCAACATTGCTTGGTTCTCGTCGACGTGTGGGCCTAAGGAGGGTGGGGCTGGGGTGTAAACGCGATCTCCGCGATAGTAAACATGTGGTGTCTCAGACAGGAAAACAGTTGAGCCAGCAGCAGTCGGATGGTTACAGACCTCCCACTGCACCAGAATTCGTGGCTAACAGTCTATCTGGAGACcgGAATATGGCCGGTGAGTTGAGCTTTCCATCAGCTGAGGAGTGTGACAGCAGTGTCACGCCAACACGGAATGTTACTGTCCCCGTGACGTTCGAGAATGTCATGCAGTATAGGCAAGTCTTAAAGGCTGCATTGAGAGAACACTTGAATATAGTTTTGTTTGAGCTTGCTCGCACCTACCACGCAGCTCTGCAGAAGGTTGACGTGTCAGGGTTTGGCGCCCACGAGCAAGGAAACCGTCAAAGTGGAGATGGTCCCAGCTGCCCCCACGGTCAGGCACGGTTGAGAGCTGTTAAGAAGGATGGGGCTAACAAGGGAAGACTGTTCTATACCTGCCCAGGAACAGGACAAGTACAGTGCAAGTGGGCCGATGAATACCAATCAAACAAGACAGCACCGAAAGGAGCGGGGCGGAAGACCTCTAATAAACTGACGCTGTTATCTTCTGAAAGCTTGATGTCCTTTTTCAGAAGTCACAATATCACGTTTTACTGTGAGTGTCGTCTCATAAGAAAAAGCACAGATGttggaaaagtgaaatttggTGCGGGAAAATCAAAGAAATGGGGACAGCAGAGAGGTGGCGATACTGATCATGGTAAGAAAAAACTATACCTGGAGCTTTCTCGGAAAGATCACTCTTCTACTTATTCGAAAGATGACATCTGGATCATATCAAAGAATTTATCGTTTAATCCAGATTCCACGTTCATAGCAAGCAGTGCTTATTATGGGCCATCCTCCAGCGGAGAGCTGGAAATACAGCCAATTAGTGGTTATTCACCTTCCAACTGGCAAAGCGGAGAAGCCGTCCATGCTCTGATGGCGTGTAATGCTGGCACTGAACTGTCTTGCATCAGCAACATCGAGGAGCATGTCAAGATGCAAAACATACCTGTTCTTCCTTATATTCTACAAAGCAGAGGACAGACAGTGGAACCAAACATCAGGAATGCCTCACGAGCCTCTTCTTTTGTTCCGCCCACTCTACGGACTTCCGTTGGTCAGCGGGATCTACCGCAAGAAGTAACGGAAAGCTTAGCTGAGGAAATGATAGCTCGTTTTAATTTAAACAAGGATCAAGCGGCCGCTCTGCTATCTTGTGCAAACATGTTTAGCTCGTCTGCAGCGGACTGCCCTTCTGTGCCAGTGTGCTTGATTCACGGCGTTTTTGGCGCCGGAAAGAGCTTTCTACTTGCTGTTGTTGTCCTGTATTTGGTGGAGTTATTCAAAGCCAGTGATGCTCTTAATCAGCAGAGTGACACTGCGTCTATGTGGAAGATTTTGGTCTCCTCTACAACGAACGTAGCAGTCGATCGCATTTTGCTAGGGTTGTTGGAACTCGGGTTTGAAGAGTTCGTTCGAGTGGGAAGCATTCGTAAGATTGCCAAACCAGTGCTACCATACAGTGTACATAGTACAGGAAGCGATAGTCAAGAGTTAAAAGAGCTTCAATCTCTTCTGAAGACTAAACTTACATCATCGGAAAGAAACCACGTCCGAAAAGGCATTGAACAGCACAAGCTCGGAGAAAATAAAAGGGTGAGTAGACAACAAACTAGCAAACAAATGAACGAATGA

Transcript

BRAKERLUST00000010434

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q0VGT4	5'-3' DNA helicase ZGRF1 OS=Mus musculus OX=10090 GN=Zgrf1 PE=1 SV=2
Q86YA3	5'-3' DNA helicase ZGRF1 OS=Homo sapiens OX=9606 GN=ZGRF1 PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003029 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF06839 all species →	zf-GRF	GRF zinc finger	Domain	Interproscan
PF10382 all species →	DUF2439	Protein of unknown function (DUF2439)	Family	Interproscan
PF13086 all species →	AAA_11	AAA domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR010666 all species →	Domain	Zinc finger, GRF-type	Interproscan
IPR052800 all species →	Family	DNA Repair Helicase ZGRF1	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR018838 all species →	Domain	5'-3' DNA helicase ZGRF1-like, N-terminal domain	Interproscan
IPR041677 all species →	Domain	DNA2/NAM7 helicase, helicase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR28535 all species →	ZINC FINGER GRF-TYPE CONTAINING 1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0008270 all species →	Molecular Function	zinc ion binding	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0006302 all species →	Biological Process	double-strand break repair	Interproscan
GO:0035861 all species →	Cellular Component	site of double-strand break	Interproscan
GO:0004386 all species →	Molecular Function	helicase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERLUSP00000010434.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.