Genomic Location: chr13:15646840...15657899
NR annotation: XP_020630990.1, V-type proton ATPase subunit H-like [Orbicella faveolata]
Species Blastomussa wellsi · all data for this species · gene families
| CDS |
| BRAKERLUST00000010926 |
| Transcript |
| BRAKERLUST00000010926 |
| Protein |
| BRAKERLUSP00000010926.1 |
| UniProt accession | Description |
|---|---|
| Q9V3J1 | V-type proton ATPase subunit H OS=Drosophila melanogaster OX=7227 GN=VhaSFD PE=2 SV=2 |
| Q9U5N0 | V-type proton ATPase subunit H OS=Manduca sexta OX=7130 PE=2 SV=1 |
| O46563 | V-type proton ATPase subunit H OS=Bos taurus OX=9913 GN=ATP6V1H PE=1 SV=3 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0005192 (this species only) · gene tree & orthology |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF11698 all species → | V-ATPase_H_C | V-ATPase subunit H | Repeat | Interproscan |
| PF03224 all species → | V-ATPase_H_N | V-ATPase subunit H | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR011989 all species → | Homologous_superfamily | Armadillo-like helical | Interproscan |
| IPR016024 all species → | Homologous_superfamily | Armadillo-type fold | Interproscan |
| IPR038497 all species → | Homologous_superfamily | ATPase, V1 complex, subunit H, C-terminal domain superfamily | Interproscan |
| IPR011987 all species → | Domain | ATPase, V1 complex, subunit H, C-terminal | Interproscan |
| IPR004908 all species → | Family | ATPase, V1 complex, subunit H | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR10698 all species → | V-TYPE PROTON ATPASE SUBUNIT H | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0000221 all species → | Cellular Component | vacuolar proton-transporting V-type ATPase, V1 domain | Interproscan |
| GO:1902600 all species → | Biological Process | proton transmembrane transport | Interproscan |
| GO:0046961 all species → | Molecular Function | proton-transporting ATPase activity, rotational mechanism | Interproscan |
| GO:0005765 all species → | Cellular Component | lysosomal membrane | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K02144 | ATPeV1H; V-type H+-transporting ATPase subunit H | - | Rheumatoid arthritis | ko05323 | deepkoala |
Genes whose expression across the transcriptome samples of Blastomussa wellsi tracks this one. Counts are over the whole network; the network view itself draws at most 100 partners per query gene (CNIDO_NET_TOP_K), so a hub gene can show fewer edges than the number below.
No co-expression network has been built for this species, so this gene has no partners to show. Networks are available for the species listed on the Network Analysis page.
Whether this gene can be visualised in the single-cell atlases of Blastomussa wellsi, and in which cell types it is a marker. Expression is stored per cell, so the violin plot and the cell-type means are computed in the viewer — open a dataset to see them.
No single-cell dataset has been published for this species. The atlases that do exist are listed in the Cell Atlas.
Chromatin and DNA-methylation data covering this gene. Peak calls are listed per sample with the genomic region the peak falls in; DNA methylation is listed as sample availability only, because those tables are queried by the DNA Methylation page itself.
No epigenomic data has been deposited for this species. The assays that exist across the site are described in the Epigenomic Data module.
Every tool below opens with this gene already entered, so you land on the analysis rather than on an empty form. Links open in a new tab.
| Analysis | What it does | Status | |
|---|---|---|---|
| Primer design | Design PCR / qPCR primers on this gene’s sequence with the published primer3 settings. Opens with the primers already computed. | template found | open → |
| BLAST | Search this gene’s sequence against the CnidoSite BLAST databases. The query is filled in and the species’ database is preselected — press Run to start. | template found | open → |
| Expression heatmap | Draw this gene’s expression as a heatmap across all RNA-seq samples, and compare it with the genes you add next to it. | no expression matrix | – |
| Gene family / orthogroup | Look this gene up in the single-copy orthogroups built from the high-quality cnidarian genomes, and see which other species carry an orthologue. | open → | |
| Gene set analysis | Start a gene-set enrichment analysis with this gene as the seed list. Add more genes on that page before running it. | open → |
