Detailed information of BRAKERLUSP00000011604.1 in Blastomussa wellsi

Genomic Location: chr14:13789093...13794627
NR annotation: XP_020600523.1, superoxide dismutase [Cu-Zn], chloroplastic-like [Orbicella faveolata]
Species Blastomussa wellsi · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P11964Superoxide dismutase [Cu-Zn], chloroplastic OS=Pisum sativum OX=3888 GN=SODCP PE=2 SV=1
P41962Superoxide dismutase [Cu-Zn] OS=Brugia pahangi OX=6280 GN=SODC PE=2 SV=1
P93407Superoxide dismutase [Cu-Zn], chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=SODCP PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000985 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00080
all species →		Sod_CuCopper/zinc superoxide dismutase (SODC)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR024134
all species →		FamilySuperoxide dismutase (Cu/Zn) / superoxide dismutase copper chaperoneInterproscan
IPR001424
all species →		DomainSuperoxide dismutase, copper/zinc binding domainInterproscan
IPR018152
all species →		Binding_siteSuperoxide dismutase, copper/zinc, binding siteInterproscan
IPR036423
all species →		Homologous_superfamilySuperoxide dismutase-like, copper/zinc binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10003
all species →		SUPEROXIDE DISMUTASE CU-ZN -RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005507
all species →		Molecular Functioncopper ion bindingInterproscan
GO:0006801
all species →		Biological Processsuperoxide metabolic processInterproscan
GO:0046872
all species →		Molecular Functionmetal ion bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K04565SOD1; superoxide dismutase, Cu-Zn familyEC:1.15.1.1
Pathways of neurodegeneration - multiple diseasesko05022deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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