Gene detail

Detailed information of BRAKERLUSP00000011648.1 in Blastomussa wellsi

Genomic Location: not available for this species
NR annotation: CAH3142347.1, unnamed protein product [Porites evermanni]
Species abbreviation BWELL · all data for this species · gene families

Sequence

CDS

BRAKERLUST00000011648

ATGGAAACCATCAAGACAGGCACTTTTAGTCTtggagaggtgtctggcttgaATGTAGAGTTCAGATATATTGAAAGTAAAATGACTGAACGATGTGATGAAACTGtcaagttcttttgtttccAAGTTCTTGAGCATCATATCAGAACAAGACATGTGGCTTCAGGGCCAGTGGATCAACAAACAATCAGGGAGATTCTCTTGACTTGGCTGCAAAATCAGTGCCGCACTGAATCAGAAGATGAAAATTTCCTAAAGAACAAGGCAGCTCAAGTCTTCAGCTTAATCTTTGTCTGTGACTATCCTGATAAATGGCCTGGGTTTTTCTCAGATCTCCTGCAATGCTTGCAGTTTGGTGCTCAAGCCGTGGACATGTACCTGAGGATTTTAAAGGCCATTGATGAGGAAGTTGTGGACAGGGATGTCGTGCGGAGTCCACAGGAGGCAGAGAGAAACACAAAGATCAAGGACACTATGAGAGACAACTGTGTTATAGAGCTTGTGGACTCCTGGTATCAGATCTTGAAAACTTACGAGAACAGCATGTCATCACTGACATGTCTGTGTCTAGACGTCATTGGAGCTTACATTGAATGGATTGATATAGGGCTGATTGCTAATGATAGATTTATTAGCACCCTGCTTCGATACATGTCAGTGGAAGTCCTTCGTGAAAGTACTTGTGATTGCATGCATGAGATTGTTTTGAAGGGAATGGAACCAGTAGCCAAACAGGAACTAGTCGAGTCTCTTCTGAGTGTTTTGGAGAAAAGTGGTGTTCTTCAACTGCGTGAGGATGAAGATGTAGATTTTCTGGCTAAACTGGCCAAACTGATGAGTGCAGCAGGATCACAACTGCTAAACAGCTACAACAAGCTCACAAAATCTGGTGATACAGAGGCAGCAGCTAAATGTCTACATGCTGCTGAGAACAAGCTACCATATCTTTTCAAATTCTTAGACcatgaagatgatgatgtcTCTCAGAATGTGTCTGGCTTTGGTTATTCTTACTTGGCTGTTTTGAAACAGaTTTCGACCCTAAGTGAACAGCAGAAGACAAACTTGAGGGGAATACTGCATGTTATTGTCAAGAAGATGAAGTATGATGAATCTTACAATTTTGATCAAGAGGGTGAAGATGAAGTGATGTTCATTGAATACAGGAAAGAGATGAAGATTCTGTTTGACAACATCGCTCAACtgGATCCTAACCTGGTGTTGGTTTCAGTtcttaatattttaaattcaaCATTTGGGGAATTAAATGGAGCAAAATTCATGGATGTAGAAATAGCTGTGCGAGTTCTCTACATGCTTGGAGAAGCTATGTCTACTCAACAATTGTACTCTGATGCCTCCAAGTTTGCAGCACTCCAGCAGATGATGAGTCTACTTGTAACAAGTAATGTGTCCTATTACAATCACTCATCAGTGGCCCAGATGttctttgaaACTGTTGTTAGATATGACAGGTTTTTTAGCAGCCAGAGTCAGCACATTCCAACAGTATTGATTGCTTTTCTAGATGAGAGGGGCCTTCGTAATCCAAACTGTACCGTCAGAAGTCGATGCtcttatttattttcaagatTTATAAAATCTCACAAAGCTAATATGCATAACTATGCCCATGACGTGCTGAAAAGGCTGCAGGCTCTTCTCGTAATTTCTCCTGATAATGGCTACCAGCAGCTTCTTTCTGCTGATGATCAGTTATTCCTTTATGAAAGTGCTGGGATTCTGATTGTTGCCAGTGGAGCAGTACCAGAGAAGCAGTTACTGTACATGAAGAATCTGTTGTCACCAATCATTGTGAAGTTTGATTCAGTTGTTACAAAGCTAATGTCTGTAACTGATGATGCCTCGTCCTCAGCATATGCCCAGCATCTTTATCATTTGGTTGCCTATGCCAGcCGGGCAAGCAAAGCATTTTCCAATCAACAAGCACTGAAAGACAGTGGGTGTGCACCATGCTTTACAGAGGCTCTACCAATTTTCCTACGTGCACTAACAATACCCATTAATCGTGACATCATTCACTCTGGAGTGCGGCAGTATCTTCATAGGATGATCGTGTGCCTGGGTGATGGAGTGCTACCTTTCATTCCAGTTGCTGTCTCGCATCTTTTGGAGGATTGTACGGCACGAGATATTCAAGAATTCATTCCACTTATCAATCAAATAATTACGAGATTTAAGCATCAAATTGGTCCTTTCTTGGGAGAAGTTTTCATGGCCATTGTGAACAGAATCTTCACTGTTCTTGGCAAACCAGCTGATGAAAAAGATGTTCAGGCGGCCAAAGAGAAGGAAACTCTGAGACGTAGTTACTTCCTGTTTGTTGCTGCTGTGGTAACAAATGATGTGATAGTGGTTCTTACTTCTCAAACTGCTCAGGATTTGCACCAAGTGTTGTTGACACTGATCCAGGGAGGTGTAGAGGTTCCAGATCCTGTGGCACAAAAGATCTCTTTCAACACTCTTCGCAAGCTGGTTGAACTGTGGGGTGGAAGTAATGGGCTGAATGGCTTTGGAGAGTTCATTTACAAAAGTATTGTACCAGCATCTTTTGTAGCCCCAATGAAGTCAACATTTGACCTGAATGATGCCCAAACCATTCTGGCACTTCAGGAGATCGCACTAACACAAAAAATGATTTTACAGAAACAGGGAGGTGAATTGATAGAATTCCTTCAAAATAAGTATTTGCCAACACTGCACCTGGCTCCCAGACTTATTCAGGAATATACCCAAGCCTTGCAGCATGCTGACATAAAAACCTTCAAGAGCTATGTGAAGGCTTTTTTCACAAACCTTCGTTCATGA

Transcript

BRAKERLUST00000011648

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O43592	Exportin-T OS=Homo sapiens OX=9606 GN=XPOT PE=1 SV=2
Q5RA02	Exportin-T OS=Pongo abelii OX=9601 GN=XPOT PE=2 SV=1
Q9CRT8	Exportin-T OS=Mus musculus OX=10090 GN=Xpot PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002505 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF19282 all species →	Exportin-T	Exportin-T	Family	Interproscan
PF08389 all species →	Xpo1	Exportin 1-like protein	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR016024 all species →	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR045546 all species →	Domain	Exportin-T, C-terminal domain	Interproscan
IPR013598 all species →	Domain	Exportin-1/Importin-beta-like	Interproscan
IPR040017 all species →	Family	Exportin-T	Interproscan
IPR011989 all species →	Homologous_superfamily	Armadillo-like helical	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15952 all species →	EXPORTIN-T/LOS1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000049 all species →	Molecular Function	tRNA binding	Interproscan
GO:0005643 all species →	Cellular Component	nuclear pore	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0006409 all species →	Biological Process	tRNA export from nucleus	Interproscan
GO:0016363 all species →	Cellular Component	nuclear matrix	Interproscan
GO:0031267 all species →	Molecular Function	small GTPase binding	Interproscan
GO:0071528 all species →	Biological Process	tRNA re-export from nucleus	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K14288	XPOT; exportin-T	-	Transfer RNA biogenesis	ko03016	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.