Gene detail

Detailed information of BRAKERLUSP00000012681.1 in Blastomussa wellsi

Genomic Location: not available for this species
NR annotation: XP_020611226.1, uncharacterized protein LOC110049744 [Orbicella faveolata]
Species Blastomussa wellsi · all data for this species · gene families

Sequence

CDS

BRAKERLUST00000012681

ATGCAACCGTCCTATAATCCAGCAAGGGAGAATCCTATTCGAACAGTAGAATTGTACCGACGGCCTGGCGGATTTGGATTTACACTTTCTAGCCAGGGACCATGTGTATTGAGCTGTATTTTAGCGGGAAGTCCCGCTCATAGAGCCGGCTTGAAGCCCGGTGATCAGATAATCGAAGTTAATGGGGCTTCGGTGGAGAACGCACCTCATGAACAAGTTGTGAAACTCATCGCGCGTTCGCCGGACGGAATGGTTCAGCTTGGAGTTCGAAAGCGTGCGGAAATTCAGAGACTGGAGACAGGCGATGATAGAATAAATGCTGAGAATCAAGAAGAAGCTACGATTAACGAAACGATATTGAACAGAGTGGATAGAGTTGTTGAAGAATTAAAATCAGGACAGTTATTCGGCGATTCGCCGTCACTTAGCAAATCTTTATCCAGCGGAAAATTTATCTCTGTGGATGATGTAGTTAGCGACGAAGAGCTGAAAGCTTCGTTTTGCGAGAGCATTAGATCAGAAAGCTCTGCACCTGGTTCTTCGCCTGCTCAGAGTTATGTCAGCAGTAGGCGGTCTAGCGAGGGAGACGTCGGATCGAATAGTTCATCATCTCCGAAATTATCTCGGCTCCTTTATCCTAAGATGACGCCTTTAAAGGGGTCTGTTCAGGCAGATATCGATCTCGAGCCGGAATTACGATCGATTGTCGGCTATTTAGGTTCAATAGAACTGCCGGCAGCGTCTAGTCTTCCGGCCGCTAGTTTAACCGCAATTCGAAATTGCGTTCGACGTCTGCGAGCCCAGCAGAAAGTTCATGTGTTGTTCTTAATGGAGATCTCTTTGATTGGAATAAAGCTCGTAGACAACGAGAAAAGAACCATTGTGACATACCCATTGAAGTCCCTAGCATTTACTGGTCTCTGCTCAGATGATAAGAGAGTGTTTGGTATTGTAACTAGGAAAGCTAATGAGTCATCCTTAGACAAGCACCATAGCAGCTGGTCTGCtccaaataatcacaaaatcGACGTGCAGAGCACAGTAAACTGCTCTTGTCATGTTTTCTCCGTTAATCCGGAACTGAGATCTCACCAAGCTCATCAGCATATCGCTGAAAAGTATGGGATTCAGTGTGCCCCTCAAGATGTGGATGGTGGTTGTATTGAGTTCCCTGCCTCGTCCAGCGCAATCCTCCGAGCTATAACTGGCATGTTTAAGGAAAGGGCCAGTTCAGAATCTGGCGGAACTTGTAGTGATGGAGAAAGTAACACAAGTTTTAGAGGACGATCTCTATCATTGTCATCAAGCCAATCAGAGTCAGATGCGGTCTTCAAACATTACCATGATGATGTTCCAACAAATGAACCTCAGACAattgattttgttgttaatCAAGTGGTAAATGGATTGTCGCAACATTTTGATTCTTTTCAAACACAAGAACAAGGTTTCCAAAATGGTTCTGAACCTCTGAAAAGAGGAGATCATCAAGAATTGCATGAAGAAGTGGTTACAGCATTGGATGAACAATTTCAAACTGCTGAGAGAAATGACTCAGGTGTTGGCTCGGATTGCTACCATCAGAATGATGCTGATGCTGTGAATGATGTAGCTGCATCAAAGGGCAGTATCTTTGGAAGATCTGTTCCTCCTGTAGTTAGTGTTTCCTCATTTCATTCTCGTGAGAGTTCAGCCGATTCTCAGATGTCTCTGGGATCACATCATAGTTCCTTGGCTGGTGTTTTCACGGAATCTGGATTGATGAACAAATCACGTCACAGCTCAGAAGTAGGACCAATGATGACAAAGGATCCAGTGCTGAGCAACTCTCAAGAGTCCTTAGCTCATTCAGATATAGTCTCAGGAACATCCTCAAGTAGGAAGCCATTGAATGCCAGTGCAAGTATCAGCTCCAGCACTCAGAGTATTCACAGTTTGAGTAGTATGCCTGGCGACATGACCCAAGTGGATGGCAGAGTAGGTCGCTGGGCCCTTGGATTTGACAAACTCATGGAAGATCCTGCTGGGCTGGGTTGCTTtaagGAATTCTTGAAGAAAGAATTTAGTGATGAGAACATTGTTTTCTGGATTGCATgtgaaaactttagaaatatcACAGATTTTGAAGAGCTGAAAATGGAAGCAGAAAGCATCTTTCACAATCATCTTGATGCAAATGCTCCAATGCCTGTTAACATTGATAGTTGTGCTGTGAAAGATGCAGAGGAACAATTGCAAAATCCAAACAATGACATGTTTCGCCTTCAGCAGCAGCAGGTTTACACACTGATGAAATTTGACAGCTACCCACGTTTCCTGAAGTCTGATGTGTACAGGCAGAGCCTTGTGACTGAAATGGAGGGAGGACCCCTCACTTGTGAAGAGGGTGAAGAAGAGAGAGAAATGAAAGGCAGAGGCTTCTTCTGGAAGAAATATATGGAAACTGTAATGAGAATTTACTGGTGGGTTATTGGATTTGAAAAACCAGCAGATGCAGAGTGCCTTTTCTTTATCCCTCTTCTGAAGAATCTGTCAGTGAATTCTCTAGTAGCAGCAGTAGAAGCAGTTTTAGCCTTGAAACGCAGCGTTCAGGTCGCAGCTGGGGCAGCAAGCACAGCAGCAAACGATCAACCAGCGGCATGGACGGAGACAGGAAAAAATCATTTCTCCCTTGGAAAGTCCTTGCACGTGGAGCAGAGACGAGAAAGCGAGTCATTCCAGTTCTGTAGAGTGGTTTTACCAGATCGCTCGTCCACCATTATACTGTGCAAGGAAGGTCAGACTCTACGCCAAGCCTTGGTGCAGTTATGCGACAGGAGACACCTCTCGCTTGTCGCACATGAAGTGTTTCTTGGCGGTGGAGACCAGCTTGTGCCTCTAGAGGAACTAGACGAGGACATGTCCATTATGGGCGGAAGAGAGGTGGTGTTGGATCACAGAACGCTTTTCAGATTGGAACTCCCTAATGGTGCGATGTTGTGGATGAAAGTCAAACCTAACCAGAGCGTAAAAGCTTGCCTGGAGCCCGTTCTCTCCCAGCAAGGCTTGTCTTCTGATCACGTGATTACACATTTAGTGGGATGTGAAGTGCCCTTGGACCCTGGTATCCCAGCAGCCTCTATCGAGCATCGTCACGTGGTCGTTGAGACTGAGGAACAGTTTACAGGAAATGCAAACACACAGTCCTCTCCTGGAAGGCCAACACTTGTACCAAGGACCTCGCGACGTGGCAGCAAGAAGAACGCACTCGACGATCTCGCTTTCGAAGAGGTCATGCGCGGTAAACGCCAAACGCTCGGCAACGGACACTTCGACGAAGCGGGAGTCTGGGTTCGAACGTTGAAGTCTTCCTTGAGCGAGGAGTCTCTAAAGGAGTTGAATAGAGGAGAGGGTAGCTTTGGCAAGAGTTTGCTGAAGGCGCAAGGTCTGTTCGCAAGAAAACGAAGAGAGGGCAGCGAACAGGATAAATTAGCTCCCGTTGTCAGTAAAAGTGGGCGATTTGCTAACGAGAAGCCTACTGATGTAAAAGACTTCTTCGAGCTGATCAGCCGTGTCCAGGCCAACAGAATGGATGATCAGAGAGGCGAACTCAAAGGAAACTTGGAGCTACCTGATTTCCTCAAAATTCCGGCTAACAGCAGGCAAGATCAAGTCAGTTATGATTTCAAAGTCCCGTATGCACCGCCTCCACCTCAAGGCTTTAGAACTGTCGATAGGACCGTGACTAAACCTGCTTTGAAGAAAACGTTTTCCACACCGGCCGGTCAGCCTCCTGAGAAAATGGACTTGATGCAGGAGTTGGCCacaaagttgtcaaaaagaacGGAGCCGACAAAAAACAGTCCTTCGTTGAAAAACAAGGCTGAGCAACATGACGAGCCAATCGAGATGCTGTTAGATTACAATTTTAACTCGAGATCCCAGCCACAGCAGCAGCCGCAGCGGCAGCAGCAAACATCTCAAGCAGTTGGTAACGCGGAGGAAAAACACAAACGGGCAGCAAGACCGAGATCTTGCACTGATGCAACCTTGTACACGATGGAAACGGTGCACGGGATGCGGGTTGAAACGGGCAATCGCCCGCAGCCCGTCGCTGACACGGAACCTCGTAAGAACGTCGCTCATGTTCATCCTTCAATACGGCCACAAGCATCGCAACCTGTCACGGTAAACAGCTTGCGAGGAATGCATTACGCTACCAATCCGCGCCGGAGCACAGCCGATCACGCAATGTATTATCGCCCTAACAACGCGGCCAGCGGTAAGCTGCAGACGGCTGCAGTATTTTCGTCAAAATCTCATCAGAATATTAGAGACACCACGCCCGCCATTTACGACGTGAAACCGGGCTCGAATAATGAAGGACTGCGGAATAAAGGAAACGATGATCATGCGGTGAAATATTCAACTACCCCGGTAGATATTCCTGCGCGAAGGCTGGTATCTGCGTACAGTTTGCCCGAAGTAAACTCTCAGAAAGCTGAAGTGCTCATTCCGTCCGCGGGGGGACCCCCACCTGTTCCTCAGAGGACAGTGTCTTATATGGAAAGGCGACCTCGGCCTAAGCCGATCACTAACCCAGAAGAGCTCCTAGCAGGACTGGAAAACACGCCTGCGCCGCGTTCGAATGCGTCTCCGCCGGAATCACCACCCTACCCAGCCATGACGCGAGTGGGAAGTCCGCTCcctcctccccccacccctccctcagGATCAATGTTCGACCTGCAGTTAGCCGACTTCTCTCCGCCACCTTCGATATGTGAATCCCCTGAGAAAATCCCCCACCCTCCTGAATATCGCGACTCTTCAAGCTTCGCGCAGGCTTCATCGTTGCAGACTTCTGCGCCGTTACCGAGCAGCACAACCTCTGAATCTGGAACAAACAACGGAAACGCTGCAAAGTACACTGGTCCTGTAGCCTATGTTAATATGCCAGGTAAGGATGCTCAAAGACAAAGGACAGGCGACAACAGAACTGTGAACTGCAGCAAAGTGCCGGTCACCCCGCACGTACGAATAACCAACGCGCACACATCAAACGCGACAAACCCATCCCATCGGGTGAGGGGTGAGGATCGTGTGGACGCATCTGCGCAGGTTCATACTCCAGCTTCTGTAACGCCAATTGTCTCGAACTTAAACAAAACAGTCACGCCACCATCGACTAACGAACGAACTCTTGTCGAGGAATCTCCCTCAGAAAATGCCACGCCCTTCACGGGTCTCAAACCTTCGATAGACAACACGGCTAAACGGCTGATACGTAACACGGGCAGTTTGCCAAGGACACGCAACGCCGATCCCGAGAAACGAAAAAACCGGCAGGATAGCGAGATTCCTAAGCTCGACCCGTACGTTACCTACGAAAAAGAAGACTTGAGAATAACGTTTGTATAA

Transcript

BRAKERLUST00000012681

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O14924	Regulator of G-protein signaling 12 OS=Homo sapiens OX=9606 GN=RGS12 PE=1 SV=1
O08774	Regulator of G-protein signaling 12 OS=Rattus norvegicus OX=10116 GN=Rgs12 PE=1 SV=1
Q8CGE9	Regulator of G-protein signaling 12 OS=Mus musculus OX=10090 GN=Rgs12 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002588 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02196 all species →	RBD	Raf-like Ras-binding domain	Domain	Interproscan
PF00595 all species →	PDZ	PDZ domain	Domain	Interproscan
PF02188 all species →	GoLoco	GoLoco motif	Motif	Interproscan
PF00640 all species →	PID	Phosphotyrosine interaction domain (PTB/PID)	Domain	Interproscan
PF00615 all species →	RGS	Regulator of G protein signaling domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003116 all species →	Domain	Raf-like Ras-binding	Interproscan
IPR001478 all species →	Domain	PDZ domain	Interproscan
IPR016137 all species →	Domain	RGS domain	Interproscan
IPR003109 all species →	Conserved_site	GoLoco motif	Interproscan
IPR036034 all species →	Homologous_superfamily	PDZ superfamily	Interproscan
IPR006020 all species →	Domain	PTB/PI domain	Interproscan
IPR029071 all species →	Homologous_superfamily	Ubiquitin-like domain superfamily	Interproscan
IPR046995 all species →	Family	Regulator of G-protein signaling 10/12/14-like	Interproscan
IPR011990 all species →	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR044926 all species →	Homologous_superfamily	RGS, subdomain 2	Interproscan
IPR024066 all species →	Homologous_superfamily	RGS, subdomain 1/3	Interproscan
IPR011993 all species →	Homologous_superfamily	PH-like domain superfamily	Interproscan
IPR036305 all species →	Homologous_superfamily	RGS domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45945 all species →	REGULATOR OF G-PROTEIN SIGNALING LOCO	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0007165 all species →	Biological Process	signal transduction	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0030695 all species →	Molecular Function	GTPase regulator activity	Interproscan
GO:0005096 all species →	Molecular Function	GTPase activator activity	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0008277 all species →	Biological Process	regulation of G protein-coupled receptor signaling pathway	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K16449	RGS; regulator of G-protein signaling	-	Signaling proteins	-	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.