Gene detail

Detailed information of BRAKERLUSP00000012737.1 in Blastomussa wellsi

Genomic Location: not available for this species
NR annotation: XP_020616671.1, vinculin-like [Orbicella faveolata]
Species Blastomussa wellsi · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q64727	Vinculin OS=Mus musculus OX=10090 GN=Vcl PE=1 SV=4
P85972	Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1
P18206	Vinculin OS=Homo sapiens OX=9606 GN=VCL PE=1 SV=4

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003606 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01044 all species →	Vinculin	Vinculin family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036723 all species →	Homologous_superfamily	Alpha-catenin/vinculin-like superfamily	Interproscan
IPR006077 all species →	Family	Vinculin/alpha-catenin	Interproscan
IPR017997 all species →	Family	Vinculin	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46180 all species →	VINCULIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0007155 all species →	Biological Process	cell adhesion	Interproscan
GO:0051015 all species →	Molecular Function	actin filament binding	Interproscan
GO:0003779 all species →	Molecular Function	actin binding	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0005856 all species →	Cellular Component	cytoskeleton	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0005912 all species →	Cellular Component	adherens junction	Interproscan
GO:0005925 all species →	Cellular Component	focal adhesion	Interproscan
GO:0008013 all species →	Molecular Function	beta-catenin binding	Interproscan
GO:0044291 all species →	Cellular Component	cell-cell contact zone	Interproscan
GO:0045294 all species →	Molecular Function	alpha-catenin binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERLUSP00000012737.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.