Gene detail

Detailed information of BRAKERLUSP00000013015.1 in Blastomussa wellsi

Genomic Location: not available for this species
NR annotation: XP_020606052.1, DENN domain-containing protein 5B-like [Orbicella faveolata]
Species abbreviation BWELL · all data for this species · gene families

Sequence

CDS

BRAKERLUST00000013015

ATGCTCGTGGCAGAGAGTGTGACAGCTattctttttcctttcatttggcAACATGTGTATGTTCCAATTCTACCAGCAGCTCTGTCTCACTTCCTGGATGCACCTGTACCATTCTTGATGGGAATATTTTGTGCTTCTGAAGAAGACAAAAAGAATCTTGTTCTGCCATCTGAGGCTTCTCTCTGCTTGGTAGACATAGATAACTGCACAGTGACAACACCAGAAGATCTCCCTGTATTCCCAGATGAGCAAGAGCTGATTGAGGAACTCAATGACACTGTTAAAAGGTTTAATGTGCGCTTACCTCAGGGCAATGAAAGTCAACTAGGAAGTGGATTCAACAGCTTAGAAAACTCTTTAGAAATTCCACAGGAAAACTATTTATCTCAAACTGCTAATGGCAGCTCTGATTACGAGACTGGAAGTAATTCAGGGTCTCCACGAGCTTCGCCTCGCTCAAGATCACCTAGCTCAAGGTCACCTCTCTCGGGGTCGCCCCAATCTGGATCACCTGTTTTAGaagccaaaaaaattaaacacaaGGACTCACCAAAAAGATCTCAGAAAATGAAGGCACGTCGATCTGCAACTGAATCTAAAGTGCCTAAATCTAAATCCTCAACTTGCTTGGATGTTACAAAAAACCCCAGACTGCAAGCAATTGCAGCAATTGCAGAGAGAACTGGTATAATAGCCCCAATTTCAACTGTTGCATCAAACTTAGAAAAATCTATTTCTGCTACTGAGCTTCAACAATTTGCTGACACTGAAAATGAGTTTATTCTTGGGGACGAGGCAAAAGAAATCTCACGAAGCCAACAACACAAGAATGAGTTGAACACTGCTGTGAGAGAAATCTTTGCAAATCGTTTCACGCAGCTTTTGTTGGAGTATGAATCATTTGTTATTCAACCTCAACAAGACCTGGAAGACTGGACCTCAAACAGAGAACAAATGCAAAACTTTGACAAAGCTTCTTTCCTTTCTGACCAACCACAGCAATTTCTTCCATTCCTTTCTCCTTTCACTGAGACACAGATGTTTGCAAGCTTCATTGACATGAAAATAATGGGGACCTGGGAAGATCCTGATCCCAGATTAGCTGTGTTTGACCAGCGTATAGAGAGACTAAAGACAAGACTTGGCGTCACACGGTCACCGTCTTATGAGAAATGCATGACTCTTAACAATGCAATCCAAGTGCTCCTGCGCCGTTCCAACTCTGTGGATCACATGGCAACTCAACCTCATCAGCTACAACTCACAGACAAGAAAGGGAATGGTAGTGGATACTTCATGACTTTAAATACAGAGATGTTATGTGATGGACCCAATGCCAAGAGtgGACATCATTCAAAAGTGAAGTGGAGAAAAAAGAGTCGCCAACAACAGCAGTCAgaacatatttttcttaataCAACTCAGGATGGGAAAAAGATGAGAGATAAACTGGCATTAAGCATAAAGAAATATATGCAGGAGACAAAAGCCAAAAGCTCTCAGTTTGGAGACATGGCACTAGAGTCTACGCAAATAGGCTTCATTCAGAAACTGCTCAAGGAATGCAGGCAGAAGACAAAGAAAATTCTGGTGCAGAAGATGGGACAAGAGGCAATAGATCTTGGACACTCTGATGCTATTGTGTCAGGAGTGGAGGAGAACACACTGATAGCCAGCTTGTGTGATCTGCTGGAAAGGGTTTGGAGCCATGGATTGGGGACAAGAGAGGGGAAATCAGCTGTGTGGTCACACTTGTTAGCTTTCCAACTTGACTGTACGGAAGACGTAGAGGAAGGTCCTTCATACAGTAAAGACACCAACAGTCTTTCACCCATGGCAGCTGCCAAGGAAACAGACAAACAGAGTCAATTGAGAAGAAGGTGCACATCACCAGATATATCAAACATGCTGCAGGCCATTCAGCTGTCTCAACAACAGCCCACAATCAGCTCTGTGTTGGCTGACATGGGTCACGTGCAGAGTATGGCTGAAATCAAGACAGACATTGGGCATGCTCGAGCATGGATCAGACTTGCTCTAGAGAAGAAAGTGCTCTCCAAACACCTGAAGCAAGTTGTTTCAAATACAGATCTTCTCAGGGAAAGATACAAAGAGTACGCCTTTCTACGGACAGAAGAGGAAAAGGAGCAGTTCTTATATCATCTTCTTTCACTGACCGCTGTCGACTTTTTTTGCTTTACAAATGGTTTTCAGAATACAGCCATTACATACAAGGTTGTTGTGAAGACCGGTAAGCAACTGGGTGGCAGTACCACCACAGCGCAGTCATGGATGACCCTGGCGGGCAGCATTACAGATACAGGCGTGATGAACATCCCCAAGAATGAGAACGAGTTCAGATTTCAGCACGCAAACCTGGGAGTTTTGACGACACTCAGGATAGGACACGATAACACAGGTTATAGCCCTGGTTGGTTCATTGAGCAAATCATCATCAAAAATGAAGTGACATCCCATATTTACAGGTTTTCTTGTGGGCGTTGGCTGGCGAAGAACATGGATGACGGTAGTACAGAGAGGCTTCTTGTCGCGGAGCTAATGAAGACCAAGGGGACCGAAGGTAAGATTTTagcttga

Transcript

BRAKERLUST00000013015

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A2RSQ0	DENN domain-containing protein 5B OS=Mus musculus OX=10090 GN=Dennd5b PE=1 SV=2
G3V7Q0	DENN domain-containing protein 5A OS=Rattus norvegicus OX=10116 GN=Dennd5a PE=2 SV=1
Q6PAL8	DENN domain-containing protein 5A OS=Mus musculus OX=10090 GN=Dennd5a PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002958 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02141 all species →	DENN	DENN (AEX-3) domain	Family	Interproscan
PF03455 all species →	dDENN	dDENN domain	Domain	Interproscan
PF02759 all species →	RUN	RUN domain	Family	Interproscan
PF01477 all species →	PLAT	PLAT/LH2 domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR043153 all species →	Homologous_superfamily	DENN domain, C-terminal lobe	Interproscan
IPR004012 all species →	Domain	RUN domain	Interproscan
IPR037516 all species →	Domain	Tripartite DENN domain	Interproscan
IPR047278 all species →	Family	DENN domain-containing protein 5A/B	Interproscan
IPR001024 all species →	Domain	PLAT/LH2 domain	Interproscan
IPR036392 all species →	Homologous_superfamily	PLAT/LH2 domain superfamily	Interproscan
IPR037213 all species →	Homologous_superfamily	RUN domain superfamily	Interproscan
IPR001194 all species →	Domain	cDENN domain	Interproscan
IPR005112 all species →	Domain	dDENN domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46070 all species →	PINSTRIPE, ISOFORM A	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005085 all species →	Molecular Function	guanyl-nucleotide exchange factor activity	Interproscan
GO:0031267 all species →	Molecular Function	small GTPase binding	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERLUSP00000013015.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.