Gene detail

Detailed information of BRAKERLUSP00000013891.1 in Blastomussa wellsi

Genomic Location: not available for this species
NR annotation: XP_020615544.1, WD repeat-containing protein 7-like isoform X2 [Orbicella faveolata]
Species Blastomussa wellsi · all data for this species · gene families

Sequence

CDS

BRAKERLUST00000013891

ATGTCTTCGTCGTCCGTGGTGCCAGTTGTTTTGTGGGGAAGTAGACCTCCTTCCCATTGCATCTCGTGCATTATAACCACTTATGATCAGAAAACAGTTGTTACTGGATCGACAGATGGACAGTTAGGAATCTGGGACTTACGGTTCGCGGACGATGGAAAGATCAAAATTATTCCAAGAAACCTGATATTTGCCCATTCAGCAAAAGTTACAGCACTGACAAAGGCTACGGATGGATGGGATAACCAGTCTAGTATTATTAGTGCTGCTGACAATGGAGAGCTGTGTTTATGGGATACAGATGATGGACTCTGTATACAAACTAATGTCATTTCAGGAATGCATTTAGCACTACTGTCATTCCACGTAGCCATTGGCACTGGTAAAGAGTGGCGTGTTGTTTGCTATGGCAGTTATTCTGATATTTATGTCCTTGATGCCTTGTCTCTTGAGATACTGTACACTCTTCGTTCTCCATCAGCCACTAATTGGATCAGTGCTGCATGTGTTGTGAGGCCAGCAAGGAGGCCAGAGGATGTTGTTGTGGCTGTATCGCTGTCTGGCATGCTAAACATTTGGGTGCTGAAACCAAATGTGGAGTCAAAGTACAGTGAACCAACCTTTGAACAGGAGCTGAACCAAATCACAAGCAGCAAAGCTACAGGGATTTGTTGTAATCCTTTCACACAAAGAAGTATTCTTGTTATATGTGCAAGAGAGTGGTTGATGTATGATGCTGGAGATTTCAAATTCCTTACATCAGTTCGCAGTCCTCCAGGTCAGAACTGGATGGGAGGAAACTTTGTTGCAGCCGACTGTGTTCTAGTTTGGAGTAAGGGCGATGTACCAGATTTTGATCCTGCCATGTTTTTCTCATATGGACGAAGAGGACCTTTTTACAAGCTGCTGTTCAGAGGAGGATCAAATGGAAGCGTCAGTGTGTGGAAGCTTAATGACAATCTGTTCACGTCAACGAAACCTTGTGACGCCCATGCAACAGgcGTGAGTCCTGTGATATCGTGTAGCTATGCAGACTGTTGGGAAACAGCCTTGAAGCCATGTGGACTGATTGACTCTTTGGATGACTGCGGACGAGCCATCCCTGTAAGCGCTTCACTGTATTTACCTGCTCAGGACTGTATCGTGTGCGGCCGGGAGGATGGTTCAATTGTTATCGTATCAGCAGCCAGAGCAGCCATCGCTCAGTTGCTTCAGCTCCCCGGCTCAGGATGGCCTGCGCATCGGGTGCTCTTAGGACACCGCGGCCGAGTGACCTGCCTGCTGTATCCTCATGATGAGTACCCTCGATATGACAGAGAATTTCTGGTATCAGGCGGAGCAGACTTCTCGGTTAAACTGTGGGACATCTTTACTGGAGACTTGTTGTACACGTTTTCTACTCACGCAGGGGAGCTGCTTCGACTTATCTGCACCCCGCCTGACTGCAGTAACCGCGTTCAGTCTTGTATTTGCTCTGTAGCCCAGGACCACTCGGTTGCGCTGCTTGGACTACGCGAGCGGAAGTGCATTATGTTGGCTTCTGTTCACGCGTTTCCGGTGGAGACAATAAAATGGCGAGCATTAGATGACTTTTTGGTGGTGGGTTGTACTGACGGCTCTGTATACGTCTGGCAAATGGAAACAGGTCACCTAGATCGGTGTGTGAGTGGACAGGTTGCTCTAAATATCTTAGCCGCATGCGACGAGGAAAAGAAATCTACCCCAGCCAGCGTTCCGTCCAAGGCTAAGAGCGCTTTGGGACGTAAGATCAGTCACCTTACTTCCAATCTGCCGACTAGCGCTGCTTCGGTTGCTGTCAAGAAACTCAGGCGGAGCTCCCATCAACAAGCCTCGGCAAGCCCTTCGTCCTCGCCACGATTATCAGGTGATGGCTATAGCGAGGGGTTGTCTTGTGGTCCACTGAAGGTGATGTCCACCAAGTGTGGAGTGAGAGATCCTGAAATACAAGTGCTTATGTTTGATATCGAGGCACTGATATGCAATTTGTTAACTGAAGAAAATCCTCTGCTAAGTGCTAAAACCTCTGGCAAGGCTGATGTTTCCAACCCAGCTGCAGGAGGAAAACGGAGAAAACGTGAGTCTCCAACACCTCAACAAATTAGGAGCGATTCAACTCAAAAATTATCGACGGATCACAAGAATAAAAAGTCGTCTTTTGTAAATGAAACCCATTATGTAGCCCAGCTTATGATATCGTGTCTTCACTCCTGGGATCTGGACCCAAACATGGATGAGGTCTGCGTTGAAAGACTGGGCCTTCTTCAACCGGTCAAACCAGTTTCGTTTGGATTGCTTACTCGTGGGAACAGGCTTTCGTTGATGTTACCAGGGTGGTATGGGGAAACAGGTGGGGAGAAGGACAGCGGCGCTGAATCCGCTTTGAAAAGAGTCTCTGGAAATCAGGCCATGTTTACAGCGTTTTTAAAAGCACAAGAGGGAACGTCGGGCGAAGCAAGTTCGCCTGTACCCTCGGAGCACAACGTTGTTTCAGCTTTAAGGACTTGTTTCCAGTCGCGCTGGCAGCTGTCCTCTGCATTGACAACTTTGCATCTTGTTGGGCTCGTATCAGTGGCTAACACGCTTATGAGCATGAATCAGATCAGTTTCGTTCCTCGAGAAAAGCGTCTTGCTCTGTTAACGAACACAGCTCGCGATATCCCGTCAAGCTCATCGAGTTACGACGAAAACGAACAATCTCCTGGCCTGAGTGAGATGGACGTACAACTTGCCATGAATCACCGCGCGCACATCAAAGCTGGGTGGAGTCAGCTGGCTGCGCTGCACTGCTGTCTCTTAGCTGATATTCTAAAAGTTTCGCCTTATAAGCCGCCTTTGTTGCATATTCTGGCAAGAAGATGGCAAGATCGATGTCTTGAGGTTCGTGAAGCAGCCCAGGCTATTTTGTTAGCAGAACTGCGGAGAATTGGGCCCGAGGGTCGTAAACAGGTCGTGGATACATGGGCCCCTCAGCTACCAAAGACGCTTGAACAGCCGGGAGGGACTGAGGACAAATCGGACAAGTCTGATGCGTCGAATTCTCCCGCTCCCCCCAGTCCGCTGTTAGGGTTTGaGCGCAGCGGCGAGGTCCAGGCCGCTGATGACGAAGTCTTGTTTCCACCCGATGACGTCAGCACTGTTTTGACCAGCGTCAAGAAGCTTCTTCAATATGACATGCGCCGTCGCCAAGCAACCGCTATCGTGTTGATGGGCGTGATAGGAGCGGAGTTCCAGCGGGAAATTGAAGTTTATTCGAGTCGTGATCGCGACGGGGAGAAAAAACAGAGCACCAGCTCACGGCGCTTGGATAAGCTGAGCGAGACTCCAGGTAACGATGGTAACAGCGCTCGTAAAGGTGACAACGAACGTAACTGCTGA

Transcript

BRAKERLUST00000013891

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9ERH3	WD repeat-containing protein 7 OS=Rattus norvegicus OX=10116 GN=Wdr7 PE=1 SV=1
Q9Y4E6	WD repeat-containing protein 7 OS=Homo sapiens OX=9606 GN=WDR7 PE=1 SV=2
Q920I9	WD repeat-containing protein 7 OS=Mus musculus OX=10090 GN=Wdr7 PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003336 (this species only)
Ubiquitin family	E3\|E3 adaptor Cullin RING\|CDC20 · all ubiquitin genes in this species
Ubiquitin family	E3\|E3 adaptor Cullin RING\|DWD · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00400 all species →	WD40	WD domain, G-beta repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR019775 all species →	Conserved_site	WD40 repeat, conserved site	Interproscan
IPR001680 all species →	Repeat	WD40 repeat	Interproscan
IPR049916 all species →	Family	WD repeat-containing protein 7/72	Interproscan
IPR015943 all species →	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR020472 all species →	Repeat	G-protein beta WD-40 repeat	Interproscan
IPR011047 all species →	Homologous_superfamily	Quinoprotein alcohol dehydrogenase-like superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR44099 all species →	RABCONNECTIN-3B, ISOFORM A	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERLUSP00000013891.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.