Gene detail

Detailed information of BRAKERLUSP00000014274.1 in Blastomussa wellsi

Genomic Location: not available for this species
NR annotation: CAH3144807.1, unnamed protein product [Pocillopora meandrina]
Species Blastomussa wellsi · all data for this species · gene families

Sequence

CDS

BRAKERLUST00000014274

ATGGAAGCCAGAGACTGCCCAGGAGCTACTTTAAGAAATTCAACTTCCGAAGACCCAAACATTGTTTGCTGTATATTGGATAGCGCAATTATCCCTTCAATCCCGCAAAACATCAATCTCTCTCTGGAATATTACCTTGATATGGTTGGAGATTCAATAAGGACAAGGGCAGTGTATCCATTTTACATGCAAGCACTGATTGAGGCTGGGATCACGAGCAGACACGAAATAGCAGCATTTACTGCCCAAATCTTATACCAAACATCTGGAATGAGTTTTTCTGAGGAGAGCTCTAACGGACAAGAATACATAGGAAAGGAAAACTTGGGAAATTCTAAGAAGTCTGATGCAAGGAAATACATCAGTCGGGGATTTTTGCCTCTAATTGGAAGGCACATGTACAAACTGGCAAAATCGTACGTTGATAGCAAAATCATCCGCCAGCCGGAGATGGTGGCCTTGCCTTCCATTGGATTTAAGGTTGCCGCGTGGTTATGGTCGAATGGATATAGTTCAGCTGACAACAGCAGCTCGCCCACGGGGAACTTAGGAAAGTTCTGCAATGGAACTGAATACAGCTTCGTGGAATTATCATACAATGTTCAGCAAAGTACAGCTGGAATCGAAAAATTGTTCCAGTACTGGAGACATGCACTTAAGGTTTTTGGTCTTCCATGTCCGTCAGAAGGGAGTGGTCCAAAGTGTTTAGTGGACAAAAGAAAAGGAAGATGTAAATTGGTGACGAGCTGTAAGGGTGAATATTCTGCAGCGGGATGTCCTGGAGCTTCGCCCATCACATGTTGTCTTGATTGTCAAAATCCGATCGATCTGGCTTTTATATTGGATTCCTCTGCCAGCGTTTCGGCGGCAAACTTTCAACTTGGACTCCAGTTCATCATTAACGTTTGCGAATATTTCGACATTGGATATCCTCAAGGAACTCGTGTGGCGCTCATCAGATACCACAGAAATGCAACGATAATGTTTACTTTTAACACTTACATCAAGAAGCAAGACGTCCTTAATGCAATTGGAGCGATACCATACAAAGCGGCCGGTAGTACTCGGACTGATTTAGCTCTTTTAGAGGCCTATAAAAACCTGTTTGGAAAACCTGATAATGGAGTCAGAACTAAAGAATTGGGTGTCCCCAGAGTACTCGTTCTTCTTACTGATGGAAAAGCAACCTCAGGGACAGCATCCGTCGTGGAGCCTTCTAACATGCTCCGGCGTGACGGGGTTagcatctttgttatagggatTGGTAGAAACATAAACAAGAATGAGTTAAATATTATTGCCAGTGACCCTGACGCCGACCACGTAGTTTCTTCGAAGTCCTTTTTGGAAGTGAATTCCATGGTAGAAAATATTCGGGAGGCCTCGTGTTATGAGCCAGCGCTTCTGGAGGAAGAAAAAGAGATGGTTTCTACTGTGGAGCAAAATGctataaaatattataaatacGACTTATCGAACAAGACAGGAATAAAGACCCTCTTTCTACAAACAACCCGTGGAATGGCTGATATCTCAGCTTCGACTATCAATAGGAATCCACGAAATAGTCGCCTTAACCTTGGATTCTGTGGACCTCATGAAGGCGAAAAGCTTTCTAAAACTGTTGGCCTTTGGCGATTGGATGAGCTTGAAAGTAACACCTTTTGTAATGTTACTGTCAATGGAGGTTGTACCAAACCTCGCTTAGTGTCTAACGACGAATTCACTGAAGAAGGATTGATCATTTATGTAAAAACGTGCGCTAGTAGATGGTTCTATGTTTCAGTCGAAGGATTTAACAGGACTAATGTCTTCAATTTGACGCTCTTCAAGGATCTCATCAGAACTAACGCCAACATGGAGAACACAGAAAGCCCAGAGAGAAACGATACGACCTTTCCGATTCCAAAAAAGATTTACGCCGGAGTCGCAGTAGCAACCGTCGGTACAGCAGCAACAGTAGCAGTTGCTGTTACGCTATCGTGTGTCAAGGAATTTGAAATCAAAGGGTCAACAaagattaaaaagaaaaagaaaaaagaagaggCTAAAAACAATAATTCAGCAGATAATAAGGCGTTTGAAAGAGACGATGATGAAAATCATCGGAGTATTCAAACTCGTTCTAGTCTCACTCCTTTATTAGAGGACCCTGAGCTGGGATCAGCCTGTGCGACATCAAGAAGTTTCACTGGTGGAGGAAACAAGGTTTTAGGAAAAGAAAAAGCGCGAGCAATTTATGTAACCGAGAAGAAGACGAGCGacataacaaaaacaaagaaatgcaagaaaagaaatgatACAGAGCAAGGAAACTGCCAAGTTACCGGAATTACCGATGATCAGCAAAGGGAATCAGTCTCGCGTCACGGTAGTCTGGTTTCTTCAATGATATATGATTTACACAGAGAAGACACATTTATAGAACAAACAGTGATGTCAGAGACGCCAGGTAATAAAGGAAGCGGCCCTGGTGTCGAACCACGGCATTTCAAAAGACAGGTTACGAGTACAAATGTCTCAGTATCTGTTGTTACATCGAAAGCAATTCAAACAGGTCAGGCTTCAAATGTTGAAGACAGAGTCAGAAGGATCGGCGCTGAGACAATGAAACGGAATTGCGATGTTCCTTTGACTAGAATCGACAATACAAAATATGGATTTCAAAATCCCGAACCGAAACGAAAGAATGCTGTAACACTGAGTTATCATAAAGATAAAAACCATTGTTTGAGCAGTGCCCTCAAAGCGGAGGAATGTTCGGGTTTAGAAAAACATGACGAGGACTCAACGCTACATTCAAAAAGTTCGGATATTGATAGCAAATCAGAAAATAAGACAAATTGCTGCTTtaaatggcagccatttttatCTAATAACAAAGTTAAGAAGACTCCAAAGGTTGAAGATGAATCAGATAAAACTGACATTGAAAAGAATGAAACTGAAGTAAGACATGATAAGAAGAATGAAAAGGTTAGTCTCCTACTTCGTTTGCAAGCAAAAGTTACAAGGCGCAAGGTAATGGCAGCTATGTGTCCTTGCTTCACTTATTTGATCCTGGAAGGAGAAACTAAAGATAACCCACAAGACAAGGAAAATGAACAGAGTGTTAAAAATCATCAAGAAATAAGGGATAGACGTTTTGAACGAGACATGCAAATGAGTCAAATGTTTTGTGTATTATCCTCACAGCTTCTATTCCTGGCCGGAGCTGACGCTAGAGATAACACGATTACCTGTGCTGTTGTGGCCATAACCATGAACTATCTTTCCCTTGTGACCCTCTGTTGGCTTATTGTCCAGGCCCTTTACCTCTTCTCCTTTACTAGGGAGCGTGAAAGCGAGGtgaaacagaaaatgaaaataaagctATATTTCGGAGGTGCATGGGGTTTACCGCTTTTTGCTGTACTAATTCTTGCTTCCAAGTACGGCACGTTCAAGAAACATCCACACTGCTGGATCTCATTCACCGACGCTTTAAGCTGGTCAGTGGCAATACCCATAATTACTTTGGGACTGGGTTTTGGTTTCTTCCTGTTTTATGTGCTTTTAAATCCTGAAGTTCGCAAGCTAATTCTTTCCGCTTGGAATTGGAAAGACACTTCAGGGACACCGTTTGACGAACATCAGGCTATTGAAATCGAAGAAGAAGAGGGCAAAGACAAAAAGAAGGGAAGGGGCAAGACTAAAGCTACAAACAATAATGCGAAAGACAAGAATGACAACAAAGAAGATACCCAAGCAGATCAGACCATCGCAAATACCGTCGAGGAGGCGAACGGAGCAAATAAAGCAGTCTCTTCAATTGCCAACAGCAAAACGAGAAATACAGAGAGAATAACCGCTGATGTAAAGAAGGAACCAAGAAAAACAAGTTTGGCTGCTCTTAAGTCCAATGCAAAACCAGGAAAGCTACCTCCTATCGCGCAACGGATGAATAAAAATCCACCTTCCAAAGGGGTAGTACCAAGACGTAAGATAAGCCCTCAAGGGCCTCCACAGAAATTCCTGGAAGATTCAAATCTTAAACGAAAGCCTGCGGGTGCTTCACCTTCACCTAAGGATAAAGTTCTGCGGTCTCTATCACCAAATGTTCAGCAGTCGCGAACTGGACCACCGGCagtgcaattcgaattcaaagATAACCTTCCTGTAGCAGCTTTCAGCTCTCCTCCACTCACCGTCCGCCCCAGATCCCCGCAGCGATCAGCCACTCAAAGGAACCAAACGCCAGGGGGCAAGAAGAAAATAGCAAAGGGGAAAAAGCCTATCAAGTCCTGA

Transcript

BRAKERLUST00000014274

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O89029	Matrilin-4 OS=Mus musculus OX=10090 GN=Matn4 PE=1 SV=1
P12111	Collagen alpha-3(VI) chain OS=Homo sapiens OX=9606 GN=COL6A3 PE=1 SV=5

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0009723 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00092 all species →	VWA	von Willebrand factor type A domain	Domain	Interproscan
PF00002 all species →	7tm_2	7 transmembrane receptor (Secretin family)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR050525 all species →	Family	Extracellular Matrix Assembly and Organization	Interproscan
IPR017981 all species →	Domain	GPCR, family 2-like, 7TM	Interproscan
IPR002035 all species →	Domain	von Willebrand factor, type A	Interproscan
IPR000832 all species →	Family	GPCR, family 2, secretin-like	Interproscan
IPR036465 all species →	Homologous_superfamily	von Willebrand factor A-like domain superfamily	Interproscan
IPR023346 all species →	Homologous_superfamily	Lysozyme-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24020 all species →	COLLAGEN ALPHA	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004888 all species →	Molecular Function	transmembrane signaling receptor activity	Interproscan
GO:0007166 all species →	Biological Process	cell surface receptor signaling pathway	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0004930 all species →	Molecular Function	G protein-coupled receptor activity	Interproscan
GO:0007186 all species →	Biological Process	G protein-coupled receptor signaling pathway	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERLUSP00000014274.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.