Gene detail

Detailed information of BRAKERLUSP00000014720.1 in Blastomussa wellsi

Genomic Location: not available for this species
NR annotation: KAJ7393878.1, regulation of response to stimulus [Desmophyllum pertusum]
Species Blastomussa wellsi · all data for this species · gene families

Sequence

CDS

BRAKERLUST00000014720

ATGGTGATTGTGTCTATATTATTCACAGAAGACCAGGACGATTGTGAAACGAAGACACTAACCAACGAAAGTTCATTCCATTCCCCTAACTACCCAAAGAATTATCCATTGAATGCCGACTGTCTTtggaagataaagattccacaGGAAATGCAGGAGATGTTTCCATTCATCAAGCTCACGTTTGAAGTATTTCAGGTGGAATACCACTCCTCTTGTGCTTACGACCAGGTGGTGGTTTTTGATGGCATAGAGGGGAACAATACGATGCTAGGAAAGTTTTGTGGTTTCAACATTCCTCCTCAGCTATTCTCTAGCAGAACTCAGATGGTTGTTAGGTTCACCAGCGATTCATCAATGGCTTACAAAGGTTTCAATGCCACATTTGAGTTTACAAACACATTCGTTCCTGCCGATATACTGTTGATTACCTCTGAACAGTCTGTAGTGTTTGGTGCAGACGTCAAACTCAACTGCTGGTCAAAAGGAATTCCCACCCCTGATGTAACATGGAAGAGAAATGGAAAAGTGTTGATAAAAGGCGAGAGGACGGCAATCTTAGAACTTTACAATGTGACATGGCGAGACATGGATGTTTATACGTGCACAGCAAACAATTCAGAAGGAAGTGACAGTGGAGAGACCAAGGTTAATGTTGTAGaATGTCCATCAtcgtgcttttgtttttctgagccCGATGAATTAAGAATTGATTGCAAAGCGTTTGACATCACCTCTGTTCCACTGACTATTCCGATGAGTGTGACGGAAATTGATCTTTCAGATAACAGGATAGAGATTTTGAAAACGGACGACTTGAAGTCCTTGAATAAACTAAAAAAACTGTACTTATCAAACAATGACATTAAGAGATTGAACAACGGAACATTTCAGGACACTGGTAACCTGGAAGAAATATTCTTGGCCCGCAACGAGATTGAAGTGCTAGAAGAAGGTTCATTTACTGGCCTGGAAAATTCCCTTGTTATTTTGTTTCTCTCAAACAATTACCTTACTTCTTTGACGAGTGGCGTATTCACCAATTTAACTTCGCTGCAATATTTGTTTCTGAGTAACAACTACATTGCTATTGTGGATTCATGGACATTTATGGGTCTAACATCTTTAATGTTGATCAATCTGGCAGACAATCCTATTACGATACTCGAGAAGAGGGCTTTTTCTATAAACGACACAAAACTTCAGACAATCTATCTGATGAACACGGAGATCGAAAAACTGAATCTGAGAGCATTCGATGGCCACAAGGACGTTAGAACATACATTTCACCTGATCACGTGGATGATGGGATTGCCACAAACCAAAAAGGTCTGTTTATCGCTCTCACCGAAGCAGGGTTTGCAGCCGGCAATGAATCCTTCAGATCTCCTTGCCCCACGGGAACATTTGTTCCCCATCTTGTGAACTTTTTGTATAGCACAGCGTTGGAGGCTGAATGCATTCCGTGCCCACCTGGTGGATTTTATTCGGACAGTGTTGCGCATGTCGACGAAGGGTGCTTTCTGTGCAATCCGGGAACTTATGTTCCACCTGAGCGTGCGCCTGGGAAGAAAGTGCTGGATTGTCACGTGTGCCCTACAGGCACCAAAACGAACCTTGATTCTGGTTACCGAGCTTGCAGGTGTATCAAAGGATTCCACCGGTATGATCGCTTCGGCCCCTGTCAAAGTTGTCCCTCAGAAGGCCTCGATTGCGTAAATGAATCTGTTTCGCTGAAGAAGGGATATTTCTGGCAATGGGATTCAGAAGAAAACATGCTTGCCTATAAAGCTTTCTCCGATAATTTAAAAATCGAAAACGACTCTTACTTTAGAAACACATCTTCTTACAATGGAACTCTTCCCCAGCCCTACCAATGTCCGCGTGTGAAATCATGCGAGGGAGGACTGGAATCTAAATGTGCCATAGGGTACTTAGGTCCTCTCTGTGAGGTGTGCGAAAGTGGATATTACAAAAGAGTTCTAGCATGTAAAGCCTGTCCGTCCAGTACCTGGGTTATCGTGCAGCTTTGCCTTGTAGGTCTGGTTGTTTTCATTCTCATTGCTATTTTGATATGGAAcggaagaagaaagaaaaacaatcaaAAGCGTCCTATGATTGACATTCTGTTAGCCAGGCTAAAGATTGTCATTGGCTTTTATCAAGTTACATCCGGGATAGTTGAAGCATTTGTTTACGTCAAGTGGCCGTCCTCCTTGTCTATGATTGGTGATTACGCTGAAGTAATCCAACTTAACATTCTGCAGTTTGTTCCGCTTCACTGCCTCTTTCCATCTTGGAAACAAGATGCGTTTAGCAACATGTACGTCATCTTGGGAAGTAATGTTGGCATTATAATGTTCGCATTTGTTGCTTATTGGATTAGAAAACTATTTCTTGCCAGAAAAAGCAATACAAATGCCTCTGAAATGAGGAATACTTTATCTACTGCAAAAGAGTTCTTATATCGTAatgtgtttttatttctttttataactTACCCAAGTACATGCTCGACAATCTTGAGAACACTTCCATTAGCTTGTCACAAGCTATGCGCCGAAAACTCCTGTACATATTACCTGAAAGCTGATTACAGCGTCAAGTGTGAGGGAGAAACGTACGAGTTTTTTACACTGTTTGCTTTCGCGGCTTCGTCGTACATCGTTTTGCTCCCAGCTCTGGTATTCGTGGTTTTGTGGAGGCGGAGAAGGCAGCAGCTTTCGTCatctcagctagatgaagatAGGGTAATTTCCAATACGGTTGACCCTGAATTTGGTGTGTATGCTGATACTGCTGAGCTTGACGAAGAAAATGGTGAAGAAGATGGAGTTGACGAAAGTTCTGATGGGCCTGGTGACGAATCGGAGCTCATTTCCGGAATGAGTTTCCTTTACGAGAATTACAAAGAAGACGCGTGGTACTGGGAGCTAGTGGAAGTTGTTAGGAAGCTCGTGTTGACTTGTGGGATtattctgattggccgagagAGCAGAGCTTATGTGGGTCTGGCCTCCATCTGTTCTGGACTGTTTGCTATTGCTTATGCCTTCCGTAAGCCCATTAAAGATGAGTTTGAAGATAAACTACAACTCACATCCCTTCTTGTGATATTTCTCAATCTTGGCATTGGAGTTATTTTGAAGATCCCTAAGGAGGCTGTACCGTCAGATGTGGATGAACATGTAGACTCATTGCTGGTTAATATTCTCGTCGTTGGAGCAAATGTCTTGGTTATTTTTCTAGTTGTGGGCCGTTACCTTGCTGTGCTGATACATAATTTTATTCTTTGGCGAAGAAACCCTCAGTGCTCCGCTTCTTGCTGTATTACTATGCTTCTGTCCTTGAACGAATTGGGAAGCGGTGTGAATTCAGTTGCAGCTGGAGGGAAGTCGTCCTTAAAGGTTCACATGGGTATAGGGCGGGTGGACATGCCTTCTATGCGATCAGCTGTGAGCGACAAGGTTGGCTTTGAGATAGAAGAAAACGGGGATGACTCAACGAAGgaaaagaataaagaaaagaTTCTAAAGGCTGTTAAGTTTATGTCGACGAATGAACGTAGCAATGAAATGGAAATTAAGAACATAACCGGAATTGCAAATACAGATGGACGCCGTTTCAGTCGCTTCCCGTCAATTCGATCAGAAACTTTAGATCCCTAG

Transcript

BRAKERLUST00000014720

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O57460	Dorsal-ventral patterning tolloid-like protein 1 OS=Danio rerio OX=7955 GN=tll1 PE=2 SV=1
Q8BQH6	CUB domain-containing protein 2 OS=Mus musculus OX=10090 GN=Cdcp2 PE=2 SV=2
O70244	Cubilin OS=Rattus norvegicus OX=10116 GN=Cubn PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000105 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13927 all species →	Ig_3	Immunoglobulin domain	Domain	Interproscan
PF13855 all species →	LRR_8	Leucine rich repeat	Repeat	Interproscan
PF00431 all species →	CUB	CUB domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000859 all species →	Domain	CUB domain	Interproscan
IPR035914 all species →	Homologous_superfamily	Spermadhesin, CUB domain superfamily	Interproscan
IPR000372 all species →	Domain	Leucine-rich repeat N-terminal domain	Interproscan
IPR001611 all species →	Repeat	Leucine-rich repeat	Interproscan
IPR007110 all species →	Domain	Immunoglobulin-like domain	Interproscan
IPR003599 all species →	Domain	Immunoglobulin subtype	Interproscan
IPR003598 all species →	Domain	Immunoglobulin subtype 2	Interproscan
IPR032675 all species →	Homologous_superfamily	Leucine-rich repeat domain superfamily	Interproscan
IPR003591 all species →	Repeat	Leucine-rich repeat, typical subtype	Interproscan
IPR036179 all species →	Homologous_superfamily	Immunoglobulin-like domain superfamily	Interproscan
IPR013783 all species →	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR050328 all species →	Family	Multifunctional Developmental and Immune Receptor	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24373 all species →	SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005615 all species →	Cellular Component	extracellular space	Interproscan
GO:0031012 all species →	Cellular Component	extracellular matrix	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERLUSP00000014720.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.