Gene detail

Detailed information of BRAKERLUSP00000015481.1 in Blastomussa wellsi

Genomic Location: not available for this species
NR annotation: XP_020604871.1, uncharacterized protein LOC110043720 [Orbicella faveolata]
Species Blastomussa wellsi · all data for this species · gene families

Sequence

CDS

BRAKERLUST00000015481

ATGGCGACGGATTCCGCCGAAGCGTTGTCGAGCGATGCTATTCAACAACAAATCATAGCATCTGAGCAAGTTTCCGCGGCTGAAGTTCTCCAAAACGCTTTGTCAGAGAACATTGCAACAACTATTCCAACTATTTCGCAGCAAAATGGGGGAATCACCACCATTTCTACATCGACTTTACCCGAGACAATGACGACTACAGAAGCGATGAtggcgactgagagtatttcagTTGGTACTCAAGGGGCTTCGACAGCTTCGCTGAGCGGGCAAGAAATCGTTGAAAATATTCCGCAAGTCCAGCAACACGAGTCCGTTGTAAGTGTTGCGGGAACTCAAGAAAGCTTGGTCATCGCAACCGAAAGTGTTGCTATTGCTACGAGCGCTTCACTTGACGTTTCACAGCAAATAGCGAATTTATCCAGTGCGGTACAAGCGAATTATCCGTGGGCCGCCCGACTTCACGACTGCGAACTTATAGGGGATTCCTACAGGGGATACGTAACCAATGAAGTAGAACTGGACTTGATCCTGACACTGCACAAGCAACATACTAACAGCTGCTGGGGAACAAGGCAGTCACCTTCATCCGCTAAACCATCCATTCGCCTGATGTGGAAATCGCAGTATGTACCATATGATGGTATACCATTCTTGAATACAGGTCGGCGAGCAACAGTGATGGAATGTCAGTATGGGCCAAGGAGAAAAGGGGCAGTTAACAAAAAACAGCTTGACTATGATGAAACTGGTCGTCCATTGAAAAGACATCGGCCTACATGTCCTGCCAGGATTTATGTCAAGAAAGTGCGCAAATTTCCTGAGTTCAGGATAGATCCAAATCTGGAAGGAAAGAATGTCCGGCAGGCCCAGGAGAGAGCATTGACGGCTCTTAGACTGGCAGGGGTGCATGTTGGTGGAGAGGAGAGGTATTATGTTCAACTCCCACTGCCGTTAGCTCATGAATACCATGATGTTGATGACATCCCTATGGATCCTGATGAGGGTGACTCTCAAGGGCAGCGTCTCAACCCTGAAGTCATGCATAAGATACGTGAACTTGTGGCGAGAGGTGTTACAGGGATCTACACTGTTAAACACTGTTTGAAGGAGTATGTAGAGAGGGAACTGTTTATAAATGCTGAACCACCACCCAGACATAACAAGTCATATTTCCCCACTATCATTGATATCCAGAATCATATTCACCAAGCGCAGATGGCACTGGCTACTGGTGCCCTTATGCCTCTACCCCCGCTTACAAATCTACCACCAAGCTCTCCAcaactgaaggaaaaaagtcGTAAGCGGAAGCATGTGCCAGAAAAACTGTCACAGTCATCCCAGACAACAGCTGAGGCTATTGCAAGTATTCAGCAGCATTATCAGTCAGCACAACCAACAATGTTAAGTACTCAAGATCAACAGCAATTAATTCAACAGAGTGGCAGGGAAAGTTACCAAGGGTCTGAAGCACACCAGCTTGAGATTATCCAAGGCTCTGAAGGTGAAGCTACTGACGTAGACATTTCTGCCCAGCCACAGATTCTTATCACTCAGGGCACTGGTGCAGGAAGAGATGAAGGTCAAGTTGTTATTGTTGTGAATGCCAGCAGTTTCTTCTCTGGTCAGTCTGATTCTGAAACACCAACGACACTCTCTTTAACCATACCAGCTTCACAAGTGGCTAGCTTGAGCCATGCCTCATTACACTCTGGGGCTGGCACACAGGCAGTTACTTTCATCCCGCAGCACACTgatgcagcagcagcagtggcTCAGACACCTGGGTCTGCTGCAACTCCCCAGACTGTTGCATTCATTCCACAGCCCCTTGACAGTAGTCGTGGTGCTGTGGCTTTCTTAGCATCCCAGCAGACAGACCATGCTAGTCAAGTTCCAGTGTCTGCAGCATACCTTGCAACTCATGGGCAGTCAAGCAATATCTTGAGTATGCTGGACTCTGCATTGCAGTCTTCTGCTGGACCTTCTTCACCCGTGATTCGAGTTGGTACAAATCTGGGAACAGTCCAGATTGCAGACAGCAGCCAGACACCTGCCACAGTTCCTGGACAAGTGTTGACAGCGCATGCGGCAGTGGAAGCTGTTATCAATGCTACCGCATCCagagaagaaacaaaacagtctAGCCATAGAGAAGAGAGTATTGATGGTGAACCTGAAGCCAAACACCAGGCGCTTGGAATGGACTTTTCATCACTGGTCAAGGAAGCAGTGTTTGAAAGTCAACAGGTTGAAGGAGAAACTAGCGAAGGACAAGCAGAACGTACAGCAAAAACTGAACAGCCACAAATGGTTACTATTCCTACATCTACAGCTGCACAGGAAACGGAAAACACGCAGCTTAGCAGTCTGTCACAAACCAACGAGAGCGGGAATTTCATTGCCATGGATACACGTCCAATCTTCATGGTAACAGAATCAGTTCTGCACTCAATGCAGGATGGGCAGGGAATTGTTACAGAGTACCAGGATAGCAGCCATTCGTTACTTGGAAATGGAGATGAAAAACTCGCCACACAGAATACCCAGTCTTTTACACCTTCCGAGGGAGCCACAGGACAACCACCAGAACAAAATGATCCACCATACACAACCAAGATTCATTCGCCTGAAATCCCTCAGGTGGTCTCCATCCCTATGGATACGGCTTCAGAAGAAGCTAAGGAACACGTGCCTGCAAATGAGAACAGTTTGAAAACGGAAGGAAGAGAGCATGGTTTACATGACTTTAGTATGGACAGTGCATGTACCGCTAATAACACTGAACAAATGAATGTGTCGTCACTTAAGTTTGAGAGTGGTCAACAGCTGACTGACGAAGAAGCTCGTAGTGTACCTCACTCGAATGCTGTTCCCACAGTTAATAACACGACAGCAGTTTTTACGCAGTAA

Transcript

BRAKERLUST00000015481

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
D4A7U2	Calcium-responsive transcription factor OS=Rattus norvegicus OX=10116 GN=Carf PE=1 SV=1
Q8VHI4	Calcium-responsive transcription factor OS=Mus musculus OX=10090 GN=Carf PE=2 SV=1
Q8N187	Calcium-responsive transcription factor OS=Homo sapiens OX=9606 GN=CARF PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006847 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF15299 all species →	ALS2CR8	Amyotrophic lateral sclerosis 2 chromosomal region candidate gene 8	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029309 all species →	Family	Calcium-responsive transcription factor	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14694 all species →	CALCIUM-RESPONSIVE TRANSCRIPTION FACTOR	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000978 all species →	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0000981 all species →	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0003700 all species →	Molecular Function	DNA-binding transcription factor activity	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0006357 all species →	Biological Process	regulation of transcription by RNA polymerase II	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K21595	CARF; calcium-responsive transcription factor	-	Transcription factors	ko03000	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.