Gene detail

Detailed information of BRAKERLUSP00000016131.1 in Blastomussa wellsi

Genomic Location: not available for this species
NR annotation: XP_020621791.1, patatin-like phospholipase domain-containing protein 7 [Orbicella faveolata]
Species abbreviation BWELL · all data for this species · gene families

Sequence

CDS

BRAKERLUST00000016131

ATGCACGTGGAAGCCGGCAGAGCGGTATACAGACAAGGCGAGCAGTCCAATTGTATTTACATTGTACTTAATGGCCGCCTTCGTTCAGTTGTTACACTCAGTAATGGCAAGAAGGAACTCGACCGCGAGGCTGGCCGCGGAGAACTGGTTGGAGTGgttGAAGTCTTAACGCAAGCCCCGAGGGCGACAACTGTACACGCAATTCGTGACACCGAACTGGCGGTTCTTCCAGATGGTCTACTAAACACAATCAAGAGACATTTTCCTCAGGTTGTTACACGTCTGATTCATCTGCTCGGTGAAAGACTTCTGGGACAGTACAGGAGAAGTTacacaagaagcgaaacattaCTCGAAAACCACCGACCGGTTGATAATCAGATCTTTGGAGGTTCAAATCTCGGTACAGTGGCTATAGTCCCCGCATCAGAAGATGTGCCAATCTCTAACTTCTCATTTGAGCTGAGCCTGGCACTGCACACTATCGGTCCCACCCTTTTGCTGACCAGCCCATTAGTGCGAAGTAAGCTTGGTAGCTCTGCAATGGACAGTATGAATGAGTACCGTTTGTCCAGCTGGCTGGGTCAACAGGAAGACCTTCACCGTATTGTGTTGTATCAAGCTGATGCTTTCATGTCTGCCTGGACTAAACGGTGTATCAGACAGGCGGACAGCATTGTCATTGTTGGCGTAGCAGACGGAAGTCCTGCGGTTGGCCAGttGGAGAAACAGCTTGAGAACATTGGAGTTCGCTCTCAGAAAGAGCTCATTCTCTTGCACCGTGAAGACGCCGCCAAAGGCTTCCGAATTTCACACACTGTCGATTGGCTGAACGCGCGGGACTGGATCTGCGCGCATCATCATGTTCGATGCTCTAAGAAGATTTTTGGAAGACGTCCTTTGTCTGAAAAGTACGCACAAAATCCTGCAGCTTATCCTCCACCAGACAGAAAATCCGACTTTTTACGTCTCGCCCGAAGACTTACGGGAACGTCTATTGGATTGATTCTCGGCGGAGGTGGAGCCAGGGGATTATCTCATGTTGGAGTCATCAAGGCGCTGGAAGAGGCAGGTATTCCCGTGGACATGGTTGGCGGTACCAGCATGGGATCGTTTGTTGGCGCAGCATACGCTGAGTCTGGTGACGTCAACAAAATGTGTCAGAAGGTCCGCGAGTGGTCACTGGACATGACGTCAATCTTCAAGAAGATCCTCGATCTGACTTATCCATTCACCTCCATGTTTTCCGGAAGTGGCTTTAATGCAAGTATAAGAAGCACGTTTGGAGAACGACAGATAGAGGATCTCTTGTTGCCTTACTTTTGCATCACAACTGACATTACGTCATCAAGAATGAGAGTGCATACTGACGGTTGCTTATGGCGTTATATCCGTGCTAGTATGTCTTTGTCAGGTTATCTACCTCCACTCTGTGACCCCAAGGATGGACATCTGTTATTAGACGGTGGATACGTCAATAATTTACCTGCGGATGTGATGAAGACGATGGGTGCTCAGACGATCATAGCAATCGATGTGGGCTCGGAAGATCCCGACGACCTCACGAATTATGGCGACCAATTGTCGGGCTGGTGGCTGCTGTGGAACAAGTGGAATCCTTTCGCTGAAACTGTCAAGATTCCTGACATGGCTGAAATTCAGTCTCGTTTGGCGTATGTGTCGTGTGTAAGACAACTGGCTGAAGTAAAGGAGAGCAGTTACTGCGAGTACCTCAGACCGCCTATCGACAGGTTCAAGACATTAGAGTTCGGCCGCTTTGATGAGATAGTGGACGTGGGCTACCATCACGGCAAGACTGTTTTCAAAGGCTGGTTAAGAGGAAACAAATTACCCGACATCTTCAGAGAGCACCCGTCCAGGGGTCACATGACCCATGCGTACGCCACAGGACAGCCTGTTGGGAAGTTGAGCAGCAGCACAACCTTCACCAACTTGGCAGAACAAATATCCCGGATTGAACCTCCTTATCCACACGACTGGTTACCATACTCCTCCTCGGATGAACTGTTAGGTTCCAGTCTCCCAGATGGTCGCCACGTGTATTCGGCCTCAGAGGAAGATgacgaagacgaagaagaagtGAGTCTGGTTCGAGTTAGACCAAGAACAGGTTCTCTCTCCGAGCACGAAGATTTACTGGCCCTCAAAGCGCAGGCACAGGCGGTAGTTCAACGCACAGAAACCGGATATGACTCGGATGACACACATCTGCGAAGACGCATGGGCCTGCTCAGACCCGACAGTGCACCATAG

Transcript

BRAKERLUST00000016131

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5RDS0	Patatin-like phospholipase domain-containing protein 6 OS=Pongo abelii OX=9601 GN=PNPLA6 PE=2 SV=1
Q8IY17	Patatin-like phospholipase domain-containing protein 6 OS=Homo sapiens OX=9606 GN=PNPLA6 PE=1 SV=3
Q3TRM4	Patatin-like phospholipase domain-containing protein 6 OS=Mus musculus OX=10090 GN=Pnpla6 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002092 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00027 all species →	cNMP_binding	Cyclic nucleotide-binding domain	Domain	Interproscan
PF01734 all species →	Patatin	Patatin-like phospholipase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001423 all species →	Conserved_site	Lysophospholipase patatin, conserved site	Interproscan
IPR016035 all species →	Homologous_superfamily	Acyl transferase/acyl hydrolase/lysophospholipase	Interproscan
IPR000595 all species →	Domain	Cyclic nucleotide-binding domain	Interproscan
IPR002641 all species →	Domain	Patatin-like phospholipase domain	Interproscan
IPR018490 all species →	Homologous_superfamily	Cyclic nucleotide-binding domain superfamily	Interproscan
IPR050301 all species →	Family	Neuropathy target esterase	Interproscan
IPR014710 all species →	Homologous_superfamily	RmlC-like jelly roll fold	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14226 all species →	NEUROPATHY TARGET ESTERASE/SWISS CHEESE D.MELANOGASTER	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004622 all species →	Molecular Function	lysophospholipase activity	Interproscan
GO:0046470 all species →	Biological Process	phosphatidylcholine metabolic process	Interproscan
GO:0006629 all species →	Biological Process	lipid metabolic process	Interproscan
GO:0005783 all species →	Cellular Component	endoplasmic reticulum	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERLUSP00000016131.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.