Gene detail

Detailed information of BRAKERLUSP00000016246.1 in Blastomussa wellsi

Genomic Location: not available for this species
NR annotation: XP_020627321.1, clathrin light chain A-like [Orbicella faveolata]
Species Blastomussa wellsi · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P08081	Clathrin light chain A OS=Rattus norvegicus OX=10116 GN=Clta PE=1 SV=1
P04973	Clathrin light chain A OS=Bos taurus OX=9913 GN=CLTA PE=1 SV=1
P09496	Clathrin light chain A OS=Homo sapiens OX=9606 GN=CLTA PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007421 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01086 all species →	Clathrin_lg_ch	Clathrin light chain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000996 all species →	Family	Clathrin light chain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10639 all species →	CLATHRIN LIGHT CHAIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005198 all species →	Molecular Function	structural molecule activity	Interproscan
GO:0006886 all species →	Biological Process	intracellular protein transport	Interproscan
GO:0016192 all species →	Biological Process	vesicle-mediated transport	Interproscan
GO:0030130 all species →	Cellular Component	clathrin coat of trans-Golgi network vesicle	Interproscan
GO:0030132 all species →	Cellular Component	clathrin coat of coated pit	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0030125 all species →	Cellular Component	clathrin vesicle coat	Interproscan
GO:0032050 all species →	Molecular Function	clathrin heavy chain binding	Interproscan
GO:0072583 all species →	Biological Process	clathrin-dependent endocytosis	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K04644	CLTA, LCA; clathrin light chain A	-	Exosome	ko04147	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.