Gene detail

Detailed information of BRAKERLUSP00000016501.1 in Blastomussa wellsi

Genomic Location: not available for this species
NR annotation: RMX37235.1, hypothetical protein pdam_00011424 [Pocillopora damicornis]
Species Blastomussa wellsi · all data for this species · gene families

Sequence

CDS

BRAKERLUST00000016501

ATGTTAGTCAGAGCCAAGGCGAGACTGAAGAAGGCGTCCCAAGTAAACAACATCAAATTCTCACTGGACCAAATGTGTGTGGCGGTCGAATCAATGCACATTGCTGCCCTggatggcaacaaagagcttcTGTGGGCCTGTGTGTCGTGCCTTTGTGTCGGTTCGGCTGCGGGACTGGCCAGTGCTTTAGGCCTGGCGTCTGTCGATGTCCGAATGGCGCGTATAGTCCATCATGCAGCGGGGTTCAGGGGCAAGgTGACCAGTGTACCGTGCTGTGTTTCAATGGTGGAACttgcaataaaaataattgCACCTGTAAAAATGGATTCACAGGAAAGTTCTGTCAATCTCGAGCAGTGTCTCAACGGAGGTCGCTGTGTTGGACCAGACAAGTGCGCATGTCCTTATGGGTTCACTGGAAACCGCTGTCAGCAAGAGCCTTGTGACAGAGGATTCCTTCCAAATTTTCGCAGCAAAGCATGTCAAGATATCGACGAGTGTAAAGCCATCCCAAAGATCTGTTCGGGTGGACGATGTATTAACTCTGTTGGTAGCTACCGCTGTGAATGTCCCGCGGGACAAAGGCTTGATGCCGATTCACAGAAATGCGTCGATAAAGATGAATGCAGTGAGGTTCCTGGCATCTGTGCAAATGGCCGATGTGAGAATACAAATGGCGGATTTAGATGTGTTTGCAATGAAGGATATATCCTAAATCAGGACAAGAGCTTCTGTATAAGTGAAATATCCGGATATTGTTACCAGCGAGTGGTAAATAATTACTGTGTTGATCAGTCGCCCGCAAACACGACCAAGCATGATTGCTGCTGCTCCCAGACAACTCCAGCGGGCTGGGGACCACTCTGTGAACGATGCTCCATCAAGGGAACACCTGAGTACACGGCGTTGTGTCCAAATGTTTCTATACCCACTGCCAAGCCTCCAGTTGATGAGTGTCAAAGACAAGGAGACCTGTGTCCAAATGGGAGGTGTATAAACGTACCTTATGGTTTCCAGTGCTTGTGTAACCAAGGATACATCCTGGGACGAGATAACAAATGTCTTGGTGTCGACCCTTGCTCTGAGACGGGTGTCTGTGAACATGGCGTGTGCGTCAGAACAAGGGACAGCTTTACTTGCCAGTGCCGGCGTGGATATAAGCTAACATCTGATAAAAGAACTTGCACAGATATCGATGAGTGTAAATCCCAGGGCGTCTGTGCTAATGGTCAGTGTATTAACTATGCTGGAGGGTATGAATGTTCGTGTGGCCCTGGGTTTGAACCCAGCTCTGATATGCGACATTGTGTCGATATTGATGAGTGTAAGCAAGATAATATATGCAAGAACGGCCGTTGTGCGAACGAGCCGGGAAGCTTTAAATGTGTTTGTGACCGTGGATTCACTCCAAGTGCAGACGGCAAGGCATGTGTGGATACGACACTAGGCCGGTGCTACGCGAAGGTGGAAGGCAGTAGATGTTCTGAACCTCTGATGAGATTTTTAACGCTATCCCAGTGCTGTTGTGGCATGGAGAACGGAGGACAGAGAGGATGGGACGATCCCTGTAGACCCTGTCCACTCAAGGGAACGGAGAAGTACAGGCAAGTCTGCTGTAAGGGACCTGGAATGACCTGCAACGGAGATGATATCGATGAATGTGTGAATAACGCCGGAATGAAGAAGAACGTGTGCACAAATGGAGAATGCCAGAACACAATGAAGGATTACATCTGTGTATGCAACGCAGGCTTTAGGAGTGATGTCACAAAGAAACTATGCAACGATATTGATGAGTGCAGAGAAGATCCTCGACTCTGTCAGGGTGGAATCTGTCAAAATTTACCGGGAACTTTCTCCTGTGATTGTCCAAAAGGCTTCACTCTGAATACAGATTCAAGAATCTGCGAAGACATTAATGAATGTGCACTTGAGGGGCAATGTATTGACGGAACTTGTATAAACTCCCCTGGGAGTTTCCGATGTCAGTGTCCACCGAATTACAAACTCGACGCCTCAGGCAGGATTTGTAAAGATACAAGAACAGCGCAGTGTTGGACAAAAATCACAAACAATCGTTGTGAGGAATCGATCAACGGCGACGTTCCCTTAGACATTTGTTGCAACACCGTAGGCAAGGGTTGGGGAAGCCCTTGTAATGAATGCCCTCCCAAAAAAGGCGATGAACGTTGTGCCGCAGGATATGCCATTCAAGATGAACCTCGCTGTACAGATATTGATGAGTGTGCCCAGTTTCCCGGTCTGTGTAACAATGGGATATGTCGTAACACTCTTGGAAGTTTTGCTTGTCAGTGTTCGGAAGGCCTTACTTTGGACGCAACACAACGAAACTGCGTCGATCTTCGCGAAGACGTTTGTTATGGTAGAGTCACCTCAAGTGGCTGCGATAAGCCGTATGGTGGACGCTACAAGAAAGTTGACTGCTGTTGCTCTGTGGTTGGTGGTGGCTGGGGCAATCCGTGCCAAGAATGCCCACTGGAAAACACAGACGAGTTTGAAGGTCTTTGTGGTAATCGAAAGAAGGGATTCAAGATTGTAGACACTTTGACCGGTCCGCGAGTTCAAGATATAAACGAGTGCGCAATACAAGGCATCTGCAACAACGGGCAATGCGTTAACGCACAGGGAGGATTCCAGTGTGAATGCAAACAAGGATACGCCTTGGATGATGAAGGAAAAGACTGCTTAGATATTGATGAATGTCGGATCTCGGCCGAGTTGTGTGGTAATGGCACGTGTACCAATCTTGCGGGCAGCTTCCGATGCGACTGTTTCCCGGGATTTGAGAATGCTCCAATGATGATGGAAGTCTGTGTAGACACGGATGAATGCGAGAAGAATCCATGTGCAGACGGCACATGCGTGAATACTGAAGGAAGCTATAAGTGTATTTGTCCGAACGGCATGGAACTCATGAAGGATGGCGTCACCTGTGAAGaCAAAGATGAATGCTCCGATCCAAACAGGTGCCTCCATGGCGTTTGTCAAAATTACCGTGGAGGATATCAGTGTTTGTGTAACCCGGGTTTCGTGGTCACGGAGGACATGAAGGACTGTGTCGATATCGATGAATGTGAACTGGATAATGGAAACTGCCAAGAAGTATGCAATAACACTCTTGGAAGTTTTGTGTGTGAGTGTAGAGCAGGATTCACTCTACAACCCGACGGGCTCACGTGTGGAGATATCGACGAGTGCTTGCTCGGCTCAGACATATGCGGACCAGGGAACACTTGTACCAATTCCGAAGGCGGTTACTACTGTACGTGTGGGCCTGGGTACGATTCTTCAGTCGACAGGAGATCCTGCATTGACGTGGATGAGTGTCAAAAAGATCCCCAGCTGTGTAGCAATGGTGTGTGCCGCAACACTCCCGGCTCGTTTGAATGTCTGTGCGGTGACGGATACGTGCTGGCCAAAGGAACAACTGCTTGTGTCGATGTGGATGAATGTAAAATTGACCTGGCTCAGTGTGGTGGCAATGCTTACTGTACAAACACTGTGGGAAGCTTTCTTTGTAACTGTAAACCGGGATTTGCAGGAAGTGACAACACGTGCACAGATATTGACGAATGCACTACAGGCGCCGCCCAGTGTCACTTCAATGCCACGTGTGTCAACACCCCAGGCTCTTTCAGTTGTGTTTGCGGGCCAGGTTACACAGGAGATGGCGCGGTCTGTAATGACATAGATGAGTGTCTGGTGGAGGAAAGTCTCTGTGAACACGGACAGTGCACTAACAAGGCTGGTTCTTATGAATGCGAGTGTGAGATTGGTTACATCCCGGCTGAAGACAGGAAGAGTTGCGTAGATATCGACGAGTGCAGAATGTTTCCATTGTGTCAACATGGTCGCTGTGAGAACATGCCAGGGATGTTTCGTTGCATTTGTGATGACGGTTTTCAGCTGGATAAACAAGGAACAAACTGTACAGATATCGATGAATGTTCCGTGACGGGGATGTGCATTAACGGTCGATGCGTGAACGAGATGGGTACATACCGCTGTGAATGTGATGGCGACTTCATGCCGAATCCCGACGGCTCAGGATGCATCGACATGCGCAGAGGGCAGTGTCATTTGAGTGTTGTTAATGACACCTGTATGAACCCGCTGCCCTCGGCTTACCGCGCCGTGTGCTGTTGTACGGCTGGAAAGGCCTGGGGAGAGCCCTGTGAACCGTGTCCTCAAAAAGGAACTGCGGAATTTCTTCGACTCTGTCCTGGCGGAATAGGATATGTTCCTGATCCATACACTCTTGTTATTAAGGATGTGGATGAATGCCGAGAGCTTCCAGGTGTCTGTAGCCAAGGTCGCTGTATAAATAAACCTGGAAGTTTTGATTGCTTCTGTCCCCAAGGATTCAAACACGACATTACAACTGGAAAATGCATTGATGTGGATGAGTGCAAAGACATTGCCTTCATTTGTGGCCTGGATGGTATATGCATCAACACGAATGGAAGTTATGACTGTGTATGTCCCGAGGGACAAAAACCGAACCCGAGGGACAAACGCTGTGAAGACAAACGGCCACAGGAATGTTTTATGGACGTGGAAGGTGAAACAACGTCCAATCCGGTTTGTAAGGGCAAGTTTTCAAAGAACGTCACGCGCACAGACTGCTGTTGTACTGGAGTGGGCGCGGCGTACGGCTCTGAGTGCAGGCTGTGTCCCAAGAGAGCATCAACAGAGTGGGTGACGTTATGTCTGGGTGTGAAGTTTGTAACACCAACTACAAGTCTTCTGGTGACTCCATCCTCACCCGTCCCCCCTGAGGTCGTTCACTCCACTGGCATCACTTTCCCTGGTGGCGCCACGACGCAGCCAGCAACGGCAGCTCCACAACTTAAAGAAGTCAATGAGTGTGAACTCTTCCCTGAGCTGTGTTTGTACGGAAAATGTATCGACACACGAACCAGCTATCGCTGTGAATGTCCGCTCGGCTTCACGCTTGGTCCAAGAGGAGTCATGTGTAAAGACGTGGATGAATGTAAGCTGTCACCATGTAAGAATGGCAGTTGTTTGAACACGTTTGGCAGTTTCCTCTGCACTTGTCCTAAGGGATCAAAGCTTGACATCACGGGTCTCGCTTGCATTGGTGAGTAA

Transcript

BRAKERLUST00000016501

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P35555	Fibrillin-1 OS=Homo sapiens OX=9606 GN=FBN1 PE=1 SV=4
Q9TV36	Fibrillin-1 OS=Sus scrofa OX=9823 GN=FBN1 PE=2 SV=1
P98133	Fibrillin-1 OS=Bos taurus OX=9913 GN=FBN1 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003150 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12661 all species →	hEGF	Human growth factor-like EGF	Domain	Interproscan
PF07645 all species →	EGF_CA	Calcium-binding EGF domain	Domain	Interproscan
PF12662 all species →	cEGF	Complement Clr-like EGF-like	Domain	Interproscan
PF00683 all species →	TB	TB domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000742 all species →	Domain	EGF-like domain	Interproscan
IPR009030 all species →	Homologous_superfamily	Growth factor receptor cysteine-rich domain superfamily	Interproscan
IPR000152 all species →	PTM	EGF-type aspartate/asparagine hydroxylation site	Interproscan
IPR018097 all species →	Conserved_site	EGF-like calcium-binding, conserved site	Interproscan
IPR017878 all species →	Domain	TB domain	Interproscan
IPR001881 all species →	Domain	EGF-like calcium-binding domain	Interproscan
IPR013032 all species →	Conserved_site	EGF-like, conserved site	Interproscan
IPR051145 all species →	Family	Growth Arrest-Specific/Sex Hormone-Binding/Vitamin K-Dependent	Interproscan
IPR036773 all species →	Homologous_superfamily	TGF-beta binding (TB) domain superfamily	Interproscan
IPR049883 all species →	Domain	NOTCH1 EGF-like calcium-binding domain	Interproscan
IPR026823 all species →	Domain	Complement Clr-like EGF domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24040 all species →	LAMININ G-LIKE DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005509 all species →	Molecular Function	calcium ion binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K23342	FBN2_3; fibrillin 2/3	-	Glycosaminoglycan binding proteins	ko00536	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.