Gene detail

Detailed information of BRAKERLUSP00000016673.1 in Blastomussa wellsi

Genomic Location: :...
NR annotation: KAJ7374297.1, hypothetical protein OS493_007382 [Desmophyllum pertusum]

Gene Structure

More details in Jbrowse

Sequence

CDS

BRAKERLUST00000016673

ATGCTGCTCAACGATAGCAGAATCGATCACGATCCAGGAATAACAGCGGTAATTTTGTTTCAGTGGGGATTTCAAAGAATGGATCGTGACAGAAATGGTTTGGTTGGCTACAAGGAGGCTGTAACAGGAAAATGGAGTCTGCGAGGCTCAAGAGTGTGCAAGCAAGCTTTCATTCAAGATTGTGACGAGGATCAAAGCACCGGTGTTTCGGAGAAGGAATGGCTAAATTGCTTCAAAATTACACCAGAGTGCAATATAAGCTGTGTGGGTGGTCAGCTTGACAACGTCCGCTGTCAGTGCCATTGTCCAATGACTGTCATTCAAGGACGGGTAGTGACGTCATTTGGATCGCCACTTCGAGACGTCAGCATTTCATTGGGTTCCACCCCTTATACGGAAATGGCAAGAACCAATAGGAGTGGACACTTTTCTATGATTGACAGTTGTGAAAATTCGTCTTATATGGTGAAGAAGAATGATTACATTCCGCTTCGTCTTGACGGTAGCATTCAAAGTGAAGTCCATCCACTATTAATTCATCTGGAAGGAGCAGAGCCAGCTTACGTCTCTGTTAACCCGAAGACCAAGATGCGCATTGTTGGACAAAGTGTGAATTTCACCTGTGAGGCAGACGGGACACCACCGATCAAAATAATCTGGTTTCACAATGGAACACGTTCGCTCAAAGTAACCTCAGGGAGCAGATCGAACCTGTTCATTCCCAGAGTTGATGGAGCTCAAGGTTTCTACACTTGCAAGGCTACAAACATTTACGGATCAGAGGTTTCCACCCCTGCCGAGTTAAAGATAAAGGATGAAATCCTCGACACCTGTAACCGAACTCCAGGCAGTCGCATCATACAACTTCCACCTGGATGCACTATAAGAGACACAGACGAGGACACGCTGGATATTGGGCAATGTTCTGACGATCCATGCTCCCAGAGTTCTTCCTTTTCTCAGACTTGCGGTGGTAAAGAAGACTGCTGTTGCGGCCCGAGACAGGGCGAGGAGTATCAAGAGGGGGTCGCCGTAGGTTGCTCATACGGTTCCAGCGAAATAGTTTTCTACCGTGTGAGGGAATGTAGTTGCAGTACTTGTGTAAAAAGAGAAACCGTATTAAAAGGTAAAGTCGTTGGTGGCCCTAACCAAGACCCAGTCAAAAATGTAACTGTGATCTTCAAGCGGAAAGAAGTTGATCGGACAAACGAAGATGGCACATTCTCATTTACTATCTCGAACGACGTAGATCGTGTGACAGTGACATTCCAAGACCCTGAAGACCAATTCTTTGACACCACTCAGACCATGCCAATTCAGAGGGGCCAGACCGTATTCCACAGGATAATTCTACAGAAGGAAGATCCGCCAGTGACGTTTGATAGCAGCCACGAACTGAAGGTACCACTAGGACACACTGGAGACAACATGGCTGAACTAGAAATGCCCGCTGATAACCTTCTGCGTAAAGACGGAAAGCCGTTCAGAGGTAAAGCAAAACTGAGAGTGAGTTTGACGGATCCAAGGAACACTACTGACTTGCTCTCTGCTCCAGGCGACTTTACAACAGTTGACCAATCAGGAAGCGTCCAGCCACTGAAAACATACGGGATACTTAGAATTAAGGTTCAGGACCAAGATAATGAGCCACTTGACCTTGCGGGAAATATGAAGATTTATCTTGACACTGAGAAGATTACGTTGCCAAGTAATTCTACTGGAGAAATGGCGCCGTGGCTGTGGTGGTTGGATGAAAAGACCGGGAGTAAGTTTCAGGCGCTGAAATATGGCACAACTTCATCAACTCCAATAAGTGTAAGCTTCTATGCCCCGGTAGACGTATCTGGTGGTACGTATGGGCTTTATACAGGACCCGGAAAGATCGCAGAAGAGCGCTGCAAGGCCGGCAGAGTGGATGAAGGGGGATTAGGAAAAGAAACCAGCTATGGATACGCGGTACTGGGCGATGATTTCGATGAGTGTTATTATTATTCTAAACGGGACTTGCCCCGTCGTTTCTGTGCTCCAGATTACGAATAA

Transcript

BRAKERLUST00000016673

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13927	Ig_3	Immunoglobulin domain	Domain	Interproscan
PF10591	SPARC_Ca_bdg	Secreted protein acidic and rich in cysteine Ca binding region	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036179	Homologous_superfamily	Immunoglobulin-like domain superfamily	Interproscan
IPR007110	Domain	Immunoglobulin-like domain	Interproscan
IPR003598	Domain	Immunoglobulin subtype 2	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR003599	Domain	Immunoglobulin subtype	Interproscan
IPR008969	Homologous_superfamily	Carboxypeptidase-like, regulatory domain superfamily	Interproscan
IPR011992	Homologous_superfamily	EF-hand domain pair	Interproscan
IPR039675	Family	Cartilage intermediate layer protein 1/2	Interproscan
IPR019577	Domain	SPARC/Testican, calcium-binding domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15031	CARTILAGE INTERMEDIATE LAYER PROTEIN CLIP	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005615	Cellular Component	extracellular space	Interproscan
GO:0005509	Molecular Function	calcium ion binding	Interproscan