Detailed information of BRAKERLUSP00000017197.1 in Blastomussa wellsi

Genomic Location: chr3:27451753...27470090
NR annotation: XP_020621181.1, elongator complex protein 1-like isoform X1 [Orbicella faveolata]
Species Blastomussa wellsi · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q2TAQ1Putative elongator complex protein 1 OS=Xenopus laevis OX=8355 GN=elp1 PE=2 SV=1
Q8WND5Elongator complex protein 1 OS=Oryctolagus cuniculus OX=9986 GN=ELP1 PE=2 SV=1
O95163Elongator complex protein 1 OS=Homo sapiens OX=9606 GN=ELP1 PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003231 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04762
all species →		IKI3IKI3 familyRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006849
all species →		FamilyElongator complex protein 1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12747
all species →		ELONGATOR COMPLEX PROTEIN 1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000049
all species →		Molecular FunctiontRNA bindingInterproscan
GO:0002098
all species →		Biological ProcesstRNA wobble uridine modificationInterproscan
GO:0002926
all species →		Biological ProcesstRNA wobble base 5-methoxycarbonylmethyl-2-thiouridinylationInterproscan
GO:0005829
all species →		Cellular ComponentcytosolInterproscan
GO:0033588
all species →		Cellular Componentelongator holoenzyme complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for BRAKERLUSP00000017197.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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