Gene detail

Detailed information of BRAKERLUSP00000017878.1 in Blastomussa wellsi

Genomic Location: not available for this species
NR annotation: XP_044163285.1, uncharacterized protein LOC122947755 [Acropora millepora]
Species abbreviation BWELL · all data for this species · gene families

Sequence

CDS

BRAKERLUST00000017878

ATGCGTTGCTTTTCCCTTTCCAATCTCAGAAGGGGCACATGGCTGTGCACTGTAAAGCTGTCCCATTCAGTTCACTCCAGTAGACCATATAGGCTCGCAAAGGCCCCTCTGGAAGACAGTGCATACCATGCTAGCTTAACAAGGGCCATTAGAATGTATGCTCCCCTTAGAAGTATAGCCAATGGGCCAGTGATCTACACCTCCGAAAAGGATGGAAGCGACGAGTCTGGTGATGGATCTGCTCAGAAACCATTCAAAACTATTATGCAGGCCTTACGTGTCACTGATGGAGAAGAACCTCTTCCCCAAATCATGGTAGATGGCAAAGCTGAAGGAGAGaaatATGAAAAACTTGCCAAGGCCCAACTCAAAAAAGTGACTAAAATTTATGCACAGGAGAAGAAAAAGTCAGAAGATAGAGAGAAAAAAGAGGCTGAAAAAGCCCAACAGAGGGAGAAAAATCTTGAAGAGgccaaaaaaattacaataaaggAAGATGAAAGTCTGCCTAAAGCTAAGAGGATAAGGATCAGTGAGTCTGTAACTCATCGTGATCAGAGAGTCAAGGTGTTTGGTTGGATTCACAGACTGAGAAGACAAGGGAAAAACCTGATGTTTGTAGTTCTTAGAGATGGCAATGGGTTTCTGCAATGTGTCTTGTCAGATCTTTTGTGCCAGACCTATGATGCCCTGATATTGGCAACAGAAGCTTCTGTGTGTCTATATGGTGTTATCAAGGAACTTCCAGAAGGAAAAACAGCTCCTGGAGGTCATGAAATGGCTGTGGATTACTGGGAACTAGTAGGGGATTCCCCTGCTGGCGGAGTTGATAACCTGGTGAATGAGGAATCTGCCATAGACACTCAGCTTGACAACAGGCACATTATGCTTAGAGGTGACACGGTTTCAAAGATTCTTAGAATGCGCTCCACAGTTACACAGAGttttAGAGATCATTACTTTGATCGCAGTTATGTTGAGGTTACTCCACCTACAATGGTACAGACACAGGTTGAAGGAGGGTCCACTCTCTTTGATTTTAACTACTTTGGTGAACAAGCATACTTGACACAGTCTTCCCAGCTTTACCTGGAGACAGTCATCCCAGCGCTGGGTGATGTGTTCTGTATTGCACAATCATACAGGGCAGAACAGTCTCGTACAAGAAGACATCTGTCAGAATACACTCATGTAGAAGCTGAATGCcctttcatttcatttgatGATCTTCTAGACAGAATAGAAGACTTGGTGTGTGATGTTGTTGACAGAGTGTTGAAGTCTCCTCATGCAGAAATACTCATGGAAATGAATCCAatggcgtccacTATTGACGGCAGTCACGGTGGGAAAAGGCCGAACGCCGGACGAAAGAGGATTTTCAATTCTCCCAGGAGAGCTAAGAAGGAGTGGGAGAAAAGGCATAAAAGAATCTACGTTGAGCAAAAGATATTCCAGGCCTGGATAAACGCGAAATTCGAGGCTGGATATCAGAACTACACCGACTCTGTTTTCGTAGAGCATTTGTTGTGTTTGGAGTTTCGTAGAAGGACATCGGAAGATGTGCCGAATCGACGAGTTGTCAGTACTTCACTGCCCGAGGAATTCGGTCATGAAAGTACAGGCCCAATGACATCTACTCCTTTGAAGCCTTCAAACGATGTAGTTCTATCTGACGAATCTCCAGTTTGTTTACAAGCTGCTGAAGTTCCAATGGATGTTTGTAGTATTACTAGCGAAGCAAGAAACCATAAAGAAAATCTGACTTTGAGCTTAAATACGTCTATGTTTTCTGATGATGAAGAAGCCTTTGATGAATTAAGCGACACAAATTGTGAAGACAATTTAAATTACACCAAATTGTTCAATTCTGCCATCCAACAACTGCATGAGGATGACACAACTAGTTCCGATGGCAGTGACACTGATTTTGACCCACTTGATGGCCCTTCCTCTGATTCTGATGACATAGAAGCGCTAAGTGAAAGTTCAGATGACGAAACAATAGAAAAAGGAGAGGAAGAGATGTTACAGAAACTTCCATCTTCTACAACGGATGGACTACAATATGGGCCTTACCTGAAATTAAGTCGAGGGGAGGAAACAAACAACTACTTGGAAGAACTTAAACtgataaatgaaaggaaattTATTTGCTCCTTGGATCTGTTCCTTGCTTTGttcaaaaaatgttgttttgttCAAGGTTGTAACAATGTACCAACAGTGAAACATCACTTTGTGGGTGCAACACTTGTTGTCCGTACCATATGTGATGCTGGACACCACTACAGTTTCTCCTCTTCCCATGAGCTGAATGGCATCTATGTGAATAATCTGCAGTCTGCAGCTGCACTGCTATTGTCTGGAAACAATTTCAGCAAAATCAGCAGAATGGCAGACTTCCTCAATCTTACCTTCTTATCTGAATCAACATATTATCGAATGCAGAGACTCTATTTGGTTCCAGCAGTGGAAGAGTGGTGGTGCTGGATGAGGGAAGAGCTAATCAAGGAATTTGCTGACCAGAAGATTGTTGTTGGTGGTGATGGTCAATGTGACTCACCAGGTTTCAGTGCAAAAAATCTTTGCTATTTCCTGATGGAAATCACCACCAGCTACATTTTAGAAATTGAGGTTCGGGATAAGCGTCATGTTGGTCTGTCTTCAACTAACATGGAGAAGGAAGCACTGAAGAATGCCTTAGCAAGACTAAAAGAAGTCCTTGATGTGGTAGAGATAGCCACTGATGCCTCATCATCAATCAAGAAGCTTATTGAAAACAACTTCAAAGATGTGTTCCACAGCCTAGATGTGTGGCACAAGTCCAAAAGCATCCGGAAGTGTTTGGCAAAGATAGGGCAAGCCAAGAAGATGCAGAAGATCAAAGTCTGGACAGATCATATTATCAAACACTTCTGGTACTGTAGCAGTGTGTGCAAGACAACCGAAACAACATCTGATGAAGAGGCTTTGTCAATAATGAAGGACAAGTGGATGGGCTTGGTGCACCATGTGTGTAACGATCATGAGTGGGATGGTGGAAAATGTGACCATGATGATGATAGTCATGACGAGAACCTTCCATGGTTTGATCGCAGAGATGAAGATTACCAAAAGTTGCAAGACGTTATTTTTGACAGAGAGCTCCTTGCAAGTTTCAAGTATTATGTCAGGTTCAGACACACGGGCAGCATTGAATGTGCCAACAGTCTTACTTTGGTTTATACGCCAAAGAGAACACCATTAAGtTACAAGGCTTTCAAAGCCAGAAAGAAACTTGCAGCAATAGACTGGAACTTTCATCTCCACCTAGAACAGGCCACCAGCAAGTCAGGGGACCAGATTGTATCCCGGAAATACAACCAGAGAACGCAACAGTGGGATCTGAGAGACGTGAAGCAAAGCAAGGGCTTTCAATACATCCCtttgcttatagcaaaaattttTGAGCTTAGGATCCGTGATAGTTCTATCGTCACTCGTAATGTGTCACTAAATAAAAGTGATCCCCGACTACTGGCCCCCACTATCGCTGCAAAGCCTCCTCCCCCTTCAAATGATCTTCTAAAGAGAAAAAGTAGGTTCAGTCTAGATTCAAGAAAATCTGCTTCAGTAGACATGGAATGTGGTGATAGCAGCCAATCAACCAAAGGAAGCAGTGAAGAAAGGCAGACAGAAGGGGAAAGTAGCAATGCTCCTTTACCAATGCAACTTTGA

Transcript

BRAKERLUST00000017878

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q2KJG3	Asparagine--tRNA ligase, cytoplasmic OS=Bos taurus OX=9913 GN=NARS PE=2 SV=3
O43776	Asparagine--tRNA ligase, cytoplasmic OS=Homo sapiens OX=9606 GN=NARS1 PE=1 SV=1
Q4R4Z1	Asparagine--tRNA ligase, cytoplasmic OS=Macaca fascicularis OX=9541 GN=NARS1 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002634 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF20917 all species →	AsnRS_N	Asparaginal-tRNA synthetase, N-terminal domain	Domain	Interproscan
PF00152 all species →	tRNA-synt_2	tRNA synthetases class II (D, K and N)	Domain	Interproscan
PF01336 all species →	tRNA_anti-codon	OB-fold nucleic acid binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR012340 all species →	Homologous_superfamily	Nucleic acid-binding, OB-fold	Interproscan
IPR048952 all species →	Domain	Asparagine--tRNA ligase, N-terminal domain	Interproscan
IPR045864 all species →	Homologous_superfamily	Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)	Interproscan
IPR004364 all species →	Domain	Aminoacyl-tRNA synthetase, class II (D/K/N)	Interproscan
IPR004365 all species →	Domain	OB-fold nucleic acid binding domain, AA-tRNA synthetase-type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR31751 all species →	SI:CH211-108C17.2-RELATED-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000166 all species →	Molecular Function	nucleotide binding	Interproscan
GO:0004812 all species →	Molecular Function	aminoacyl-tRNA ligase activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0006418 all species →	Biological Process	tRNA aminoacylation for protein translation	Interproscan
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERLUSP00000017878.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.