Genomic Location: not available for this species
NR annotation: XP_020608853.1, basement membrane-specific heparan sulfate proteoglycan core protein-like [Orbicella faveolata]
Species Blastomussa wellsi · all data for this species · gene families
| CDS |
| BRAKERLUST00000019276 |
| Transcript |
| BRAKERLUST00000019276 |
| Protein |
| BRAKERLUSP00000019276.1 |
| UniProt accession | Description |
|---|---|
| Q05793 | Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 |
| P98160 | Basement membrane-specific heparan sulfate proteoglycan core protein OS=Homo sapiens OX=9606 GN=HSPG2 PE=1 SV=4 |
| Q06561 | Basement membrane proteoglycan OS=Caenorhabditis elegans OX=6239 GN=unc-52 PE=1 SV=2 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0001081 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00052 all species → | Laminin_B | Laminin B (Domain IV) | Domain | Interproscan |
| PF00054 all species → | Laminin_G_1 | Laminin G domain | Domain | Interproscan |
| PF13927 all species → | Ig_3 | Immunoglobulin domain | Domain | Interproscan |
| PF00008 all species → | EGF | EGF-like domain | Domain | Interproscan |
| PF07679 all species → | I-set | Immunoglobulin I-set domain | Domain | Interproscan |
| PF00053 all species → | Laminin_EGF | Laminin EGF domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000034 all species → | Domain | Laminin IV | Interproscan |
| IPR036179 all species → | Homologous_superfamily | Immunoglobulin-like domain superfamily | Interproscan |
| IPR013783 all species → | Homologous_superfamily | Immunoglobulin-like fold | Interproscan |
| IPR000742 all species → | Domain | EGF-like domain | Interproscan |
| IPR001791 all species → | Domain | Laminin G domain | Interproscan |
| IPR002049 all species → | Domain | Laminin-type EGF domain | Interproscan |
| IPR013320 all species → | Homologous_superfamily | Concanavalin A-like lectin/glucanase domain superfamily | Interproscan |
| IPR007110 all species → | Domain | Immunoglobulin-like domain | Interproscan |
| IPR003599 all species → | Domain | Immunoglobulin subtype | Interproscan |
| IPR009030 all species → | Homologous_superfamily | Growth factor receptor cysteine-rich domain superfamily | Interproscan |
| IPR013106 all species → | Domain | Immunoglobulin V-set domain | Interproscan |
| IPR001881 all species → | Domain | EGF-like calcium-binding domain | Interproscan |
| IPR013098 all species → | Domain | Immunoglobulin I-set | Interproscan |
| IPR050958 all species → | Family | Cell Adhesion and Cytoskeletal Organization | Interproscan |
| IPR003598 all species → | Domain | Immunoglobulin subtype 2 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR45080 all species → | CONTACTIN 5 | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005509 all species → | Molecular Function | calcium ion binding | Interproscan |
| GO:0005886 all species → | Cellular Component | plasma membrane | Interproscan |
| GO:0007156 all species → | Biological Process | homophilic cell adhesion via plasma membrane adhesion molecules | Interproscan |
| GO:0008046 all species → | Molecular Function | axon guidance receptor activity | Interproscan |
| GO:0030424 all species → | Cellular Component | axon | Interproscan |
| GO:0043025 all species → | Cellular Component | neuronal cell body | Interproscan |
| GO:0050808 all species → | Biological Process | synapse organization | Interproscan |
BRAKERLUSP00000019276.1.
