Gene detail

Detailed information of BRAKERLUSP00000020151.1 in Blastomussa wellsi

Genomic Location: not available for this species
NR annotation: XP_027051444.1, rho guanine nucleotide exchange factor 10-like [Pocillopora damicornis]
Species abbreviation BWELL · all data for this species · gene families

Sequence

CDS

BRAKERLUST00000020151

atgcCTGTCAAGCACTTCAAGACCCACGTTAATGATGCGCCATGGATCACCGCAGAGTTTAAAAACCTTATCAAGCTGCGCCAGCAAGCGTTCAACAAGGGAGATAAGGACGCCTTCAGCCGCTACCGCAACATCGTCAACCGCGAGCGAAAATCTCTTCGCGGCAAGTACTTTGCTAGTAAAGTTGACCATCTCAAGTCCACCAAGCCCTCTCAGTGGTGGAACGCTGTTAAACGGGTCGCAGGAATGGTCCCCTGCTCCAGATCAGAGTCTTTTCTTTCCAGCTTACATTCAGATGGCGATTTGAGCGAACTTGAAATAGCCAACAAAATTAACTCAGCCTTTCTTGCTCCAATGAAAAACTTCCAGCCATTAATGCCAATCGCAGCCCACGAGGATGACCCCTATGTGTTGTCTGTATCCGAGTCTGCGGTCTTGGCTGCTTTGAAGCAATTAAACCCGCGTAAAGCAGCCGGACCTGACTGTGTTCCCAATTGGCTCCTGCGAGAGTATGCAGAGGTTCTAGTTGAACCCGTTACGGCTATACTCAACTCCAGCTACAAAGAGCAAAAGCTGCCCTCGCCGTGGAAGCTAGCTGACGTTGTACCGCTACCCAAACAGAAACCTGTTGAAGACCTAAGTAAGCATCTACGCCCCATTTCCCTGACCCCCACCATCTCGAAGCTCGCGGAAGACTTTGTCGTAGCCACTCATGTTGGTCCCGCAGTACTCAAGAAGATCGACCATGATCAGTATGGCGGCATCCCCGAATCCTCCACCTTATTCGCCCTCATCTCGATGTTCCACCACTGGTCAAAGGCCACAGACGGGACAGGGGCAGCCGTTAGGGTCGTGCTATTTGACTATCGAAAGGCTTTTGATCTCATTGATCATACGATCCTCGTTGCCAAGATCAATGGTCTTGACATGCCGCCCAGCATTAAAGCCTGGGTGACCGATTTCCTGATAAACCGGCAACAACGGGCGTTTTGTTTTCTCAGGAAAAAAGATCGTGCCTTGCACATGGTAATAGACCCCAAAGCTAAATACAAGTTGAAATGGAATGTGCCGCTGAATGATGTCGATATAGTGGAGTATGGTCCAGGCGTTAACATTTTAACCAGTTCTTATAGGACAACAATCAGCCATTCCAAGGAAGGCCAATATCGCAGTACCTACAGCGGCTGCCGTGAGCATTTTGAAGACCTGCAACAGGACAtggctgtgattggtcaaataGCTGGCCTCGTTGCCACGCTACGGCGGTCATATCAGGTTTTGGATGTCGAAAAGGTTCAACAGTGGCACAAAGCCGTGCAGAGGACCATAGAAGAAGAAACTAGACTAGCAAACCTGTACTGGCTGGAATTATCTTTACCTTCCAAACATGGCCATGTAAACTACATTTTCAGCACGGATTCGCCATCGGTGAAAGCCGAGTGGGTTACAGCtctaaatacgtcaaaattgaGACTGGCACCTGAGAACAATCCTGGTTGGTATCTCCCAGAGGATGACGGGACAGGAGGCGTGGCTATTCAGCGGCGTAACATGCCGCTACTCAAAGACAATTCGAGTTTATTTCTGCTCAACCAAAAAGCCAAGATTCAATGTATCGTAAGTTGTCCGGATACCGAAGATCCTCTTCCGGGCGTCCACGACAATTACAACACTCTCTGGCTTCTTTGTGGAGGTGGAGACCATGCCGGTCACGTGACGGTAGCCAAAGTCTCACTTGTCTACCCTCCACAAGTGGTAGAGTCGTTCCACGTGTGCGATTCGGTCATTGTGTGTGGGGAGTATGTGGAGCGAACTTGTGGAGAACAGAAGAAGTTCAAAGGAACGATGTCTGGGAGGTTCGGCTTTCCTTTCCCCACGGTCTGGCTAGGAACTCAGGGAGGAAGAATTTTCATCTACAATGCAGTGGACTCTACTCGGCGCTACGTCATGTCAGTGAGGCTTCCTGATGCGATCTTGGCCATCAAGACGGTGAATATGAAAATCTTTGCTGGTGTGGCTGATGGTAGCGTTGTGATTTTCAAACGGAACCAAGAGGGAACGTGGAACTTCAGTGAACCGAAGGCCGTCGGTCTCGGGAAGTTTCCTGTAATGGCGATGGCTGTCGTGAGAGAAAATCTATGGTGTTCCTGTGGTAACAAGTTGTTCATTATGAATCACGATGAAGAAGCTATTAAGCACGTCATTGAAGTTGACGAAAACCCGAAAACCAGTATCAAGCATGTTGTTTGTTACGGTGTTGGCGTGTGGGTGTCCGTTTGGAAGTTCCCATCAATCAAGTTGTTCCACAGCGAGACACTAAAGCACGTGCAGGACATTAGTATCGTTACCCCAGTCACCAACATGCAGAAGGATATTGATTCTCAGCTGGAAAAGACCAAACTGGACCACGTTTACGCCACAGCCTTAGCTGCATATGAAGGGTTACTGTGGGTGGGGACGAGTGTCGGAGTTACTCTGGTATTTCCACTTCCTCGACTGGAAGGAATACCTCTTGTTTCTGGCAAAGCTTGCGTAGCTTTTCACTCATACGGCAGCAGTGTACGCTGCTTTCAACCGCTGAAGAACAACCCGAGCCCCGGGACGGGATACGGACCCGAGGGACGCAAACTGGACTTCAGTTTGTTCCGGGAACACGAAGTTAGGGATGCATGCGTACAGACGGACGCGGGAGTCTCGGGAGCCTGGTCCTACGCGTCACGTGGTCCCGCGTTGGCCAATCAAAGTAAAGCTTCCCCCCAAAAGGCCGACAACATTACACCTCCGGTTGCTGGTCGACAAACTACTGACCAAGAGGGTGAGGGTGAAGAGGATTTCTCCGATGAAGATGTCCACAGTGATGACGAATTTAACTTCGTCGAAGACAAACAGAATACGCTAAGTGGCATGCGCATATCAAGTGTAGGGACTGCATCTTCAACGGGCTCATTTAGTGTCAGGTTCGAAGGCAGTGAGGACCCTACCAAGAGCCAAACTGCGAGTTCGGTGCAGTCCGAAGATTTCATCGGCAAGACTGAGTTCCGAGTGGACGACTTCGCCCGAATGTTATCCGAATTCAAAGGCTTCGGGGGCACGCTTCCTCCGAGTGTACTCGAGCCTCCACGAATTCCGCTCGTCATTGTAAACGAGCAGTCCCCGACAGCGTCGTCTGTCGATGCGAAAGGTGATGGGACTTCTGCTGAATTCCAAGAAACCGGAAGAGAATCTGCTGCAAGTGGCGAAGTGACCGGAAGTGTTTCTGCAGACGGTGAGCCAGAAAGCGGAAGTGGAAGCGCAACTGCGGAAGTTAGGGGAAGAATGAAATCTGTTGGTGAATATGTGAAACTAAATGAAGCTCGGGCCGCTGCTGAGACCCAGGGAATTATAGGAATTAATTCATCCTCTCCAGATCACCCCAGCACAAAAAGTGACCTTCCAAAGGAAGTTGAatccaaaccggaaatgaaaatCACAGCCGGAAGTCTCCTCGCTACTCCGGATGTCATTGGCGCGCCAAGTTATATAGAAGTTCTCAGCGACACTGATTCACGAGCTGCAACAATACCGAAAACGTCGATGACACCGGAAGTAATTTACGACAGTCCTCGCCAAGACGATAGCTATAGTGTATTTGAGAGAAGCCAAGCGAGTAATTCCGTCGCCGGAACTTTAGCGACACCCAAAGTGGAGAACTTAAAACCGAGGCTGCCGTTCCCAGTCCTCTTGGTGAGCGCGGGTGAAGGATATGCGGACTTGCGTCGAAAACGGCGGGATGAAAATGACAAAGAGCCGAGGGTTATGATCTGGCAGATTAGCTAA

Transcript

BRAKERLUST00000020151

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O15013	Rho guanine nucleotide exchange factor 10 OS=Homo sapiens OX=9606 GN=ARHGEF10 PE=1 SV=4
Q8C033	Rho guanine nucleotide exchange factor 10 OS=Mus musculus OX=10090 GN=Arhgef10 PE=1 SV=2
Q9HCE6	Rho guanine nucleotide exchange factor 10-like protein OS=Homo sapiens OX=9606 GN=ARHGEF10L PE=1 SV=4

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003930 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF19056 all species →	WD40_2	WD40 repeated domain	Repeat	Interproscan
PF19057 all species →	PH_19	PH domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011047 all species →	Homologous_superfamily	Quinoprotein alcohol dehydrogenase-like superfamily	Interproscan
IPR015943 all species →	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR039919 all species →	Family	Rho guanine nucleotide exchange factor 10/17	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12877 all species →	RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005085 all species →	Molecular Function	guanyl-nucleotide exchange factor activity	Interproscan
GO:0030036 all species →	Biological Process	actin cytoskeleton organization	Interproscan
GO:0051496 all species →	Biological Process	positive regulation of stress fiber assembly	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERLUSP00000020151.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.