Gene detail

Detailed information of BRAKERLUSP00000020264.1 in Blastomussa wellsi

Genomic Location: not available for this species
NR annotation: XP_022797245.1, cytoplasmic tRNA 2-thiolation protein 1-like [Stylophora pistillata]
Species abbreviation BWELL · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5FW05	Cytoplasmic tRNA 2-thiolation protein 1 OS=Xenopus tropicalis OX=8364 GN=ctu1 PE=2 SV=1
Q803X1	Cytoplasmic tRNA 2-thiolation protein 1 OS=Danio rerio OX=7955 GN=ctu1 PE=2 SV=1
Q05AW7	Cytoplasmic tRNA 2-thiolation protein 1 OS=Xenopus laevis OX=8355 GN=ctu1 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004606 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01171 all species →	ATP_bind_3	PP-loop family	Family	Interproscan
PF16503 all species →	zn-ribbon_14	Zinc-ribbon	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011063 all species →	Domain	tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal	Interproscan
IPR000541 all species →	Family	Cytoplasmic tRNA 2-thiolation protein 1	Interproscan
IPR014729 all species →	Homologous_superfamily	Rossmann-like alpha/beta/alpha sandwich fold	Interproscan
IPR035107 all species →	Family	tRNA thiolation protein, TtcA/Ctu1 type	Interproscan
IPR032442 all species →	Domain	Cytoplasmic tRNA 2-thiolation protein 1, C-terminal	Interproscan
IPR020554 all species →	Conserved_site	Uncharacterised protein family UPF0021, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11807 all species →	ATPASES OF THE PP SUPERFAMILY-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000049 all species →	Molecular Function	tRNA binding	Interproscan
GO:0002098 all species →	Biological Process	tRNA wobble uridine modification	Interproscan
GO:0034227 all species →	Biological Process	tRNA thio-modification	Interproscan
GO:0002143 all species →	Biological Process	tRNA wobble position uridine thiolation	Interproscan
GO:0002144 all species →	Cellular Component	cytosolic tRNA wobble base thiouridylase complex	Interproscan
GO:0005739 all species →	Cellular Component	mitochondrion	Interproscan
GO:0008033 all species →	Biological Process	tRNA processing	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERLUSP00000020264.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.