Genomic Location: not available for this species
NR annotation: XP_020606525.1, exosome component 10-like [Orbicella faveolata]
Species Blastomussa wellsi · all data for this species · gene families
| CDS |
| BRAKERLUST00000020675 |
| Transcript |
| BRAKERLUST00000020675 |
| Protein |
| BRAKERLUSP00000020675.1 |
| UniProt accession | Description |
|---|---|
| D4A1X2 | Exosome complex component 10 OS=Rattus norvegicus OX=10116 GN=Exosc10 PE=1 SV=2 |
| P56960 | Exosome complex component 10 OS=Mus musculus OX=10090 GN=Exosc10 PE=1 SV=2 |
| Q01780 | Exosome complex component 10 OS=Homo sapiens OX=9606 GN=EXOSC10 PE=1 SV=2 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0004012 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00570 all species → | HRDC | HRDC domain | Domain | Interproscan |
| PF08066 all species → | PMC2NT | PMC2NT (NUC016) domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR036397 all species → | Homologous_superfamily | Ribonuclease H superfamily | Interproscan |
| IPR002121 all species → | Domain | HRDC domain | Interproscan |
| IPR045092 all species → | Family | Exosome complex exonuclease Rrp6-like | Interproscan |
| IPR012337 all species → | Homologous_superfamily | Ribonuclease H-like superfamily | Interproscan |
| IPR010997 all species → | Homologous_superfamily | HRDC-like superfamily | Interproscan |
| IPR012588 all species → | Domain | Exosome-associated factor Rrp6, N-terminal | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12124 all species → | POLYMYOSITIS/SCLERODERMA AUTOANTIGEN-RELATED | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0003676 all species → | Molecular Function | nucleic acid binding | Interproscan |
| GO:0000175 all species → | Molecular Function | 3'-5'-RNA exonuclease activity | Interproscan |
| GO:0000176 all species → | Cellular Component | nuclear exosome (RNase complex) | Interproscan |
| GO:0000467 all species → | Biological Process | exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | Interproscan |
| GO:0003727 all species → | Molecular Function | single-stranded RNA binding | Interproscan |
| GO:0005730 all species → | Cellular Component | nucleolus | Interproscan |
| GO:0071035 all species → | Biological Process | nuclear polyadenylation-dependent rRNA catabolic process | Interproscan |
| GO:0071036 all species → | Biological Process | nuclear polyadenylation-dependent snoRNA catabolic process | Interproscan |
| GO:0071037 all species → | Biological Process | nuclear polyadenylation-dependent snRNA catabolic process | Interproscan |
| GO:0071038 all species → | Biological Process | TRAMP-dependent tRNA surveillance pathway | Interproscan |
| GO:0071039 all species → | Biological Process | nuclear polyadenylation-dependent CUT catabolic process | Interproscan |
| GO:0071040 all species → | Biological Process | nuclear polyadenylation-dependent antisense transcript catabolic process | Interproscan |
| GO:0071044 all species → | Biological Process | histone mRNA catabolic process | Interproscan |
| GO:0071051 all species → | Biological Process | poly(A)-dependent snoRNA 3'-end processing | Interproscan |
| GO:0000166 all species → | Molecular Function | nucleotide binding | Interproscan |
| GO:0044237 all species → | Biological Process | obsolete cellular metabolic process | Interproscan |
| GO:0006396 all species → | Biological Process | RNA processing | Interproscan |
BRAKERLUSP00000020675.1.
