Gene detail

Detailed information of BRAKERLUSP00000021241.1 in Blastomussa wellsi

Genomic Location: not available for this species
NR annotation: XP_020617305.1, 39S ribosomal protein L30, mitochondrial-like [Orbicella faveolata]
Species Blastomussa wellsi · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
B1I1L7	Large ribosomal subunit protein uL30 OS=Desulforudis audaxviator (strain MP104C) OX=477974 GN=rpmD PE=3 SV=2
Q5L8C7	Large ribosomal subunit protein uL30 OS=Bacteroides fragilis (strain ATCC 25285 / DSM 2151 / CCUG 4856 / JCM 11019 / LMG 10263 / NCTC 9343 / Onslow / VPI 2553 / EN-2) OX=272559 GN=rpmD PE=3 SV=1
Q64NM6	Large ribosomal subunit protein uL30 OS=Bacteroides fragilis (strain YCH46) OX=295405 GN=rpmD PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0010611 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00327 all species →	Ribosomal_L30	Ribosomal protein L30p/L7e	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036919 all species →	Homologous_superfamily	Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamily	Interproscan
IPR016082 all species →	Domain	Large ribosomal subunit protein uL30-like, ferredoxin-like fold domain	Interproscan
IPR005996 all species →	Family	Large ribosomal subunit protein uL30, bacterial-type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15892 all species →	MITOCHONDRIAL RIBOSOMAL PROTEIN L30	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003735 all species →	Molecular Function	structural constituent of ribosome	Interproscan
GO:0006412 all species →	Biological Process	translation	Interproscan
GO:0015934 all species →	Cellular Component	large ribosomal subunit	Interproscan
GO:0005739 all species →	Cellular Component	mitochondrion	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K02907	RP-L30, MRPL30, rpmD; large subunit ribosomal protein L30	-	Ribosome	ko03011	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.