Gene detail

Detailed information of BRAKERLUSP00000021270.1 in Blastomussa wellsi

Genomic Location: not available for this species
NR annotation: XP_020603546.1, 28S ribosomal protein S18a, mitochondrial-like [Orbicella faveolata]
Species Blastomussa wellsi · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
B0K8G2	Small ribosomal subunit protein bS18 OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) OX=340099 GN=rpsR PE=3 SV=1
B0K5L7	Small ribosomal subunit protein bS18 OS=Thermoanaerobacter sp. (strain X514) OX=399726 GN=rpsR PE=3 SV=1
Q8R6M3	Small ribosomal subunit protein bS18 OS=Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4) OX=273068 GN=rpsR PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0009320 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01084 all species →	Ribosomal_S18	Ribosomal protein S18	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036870 all species →	Homologous_superfamily	Small ribosomal subunit protein bS18 superfamily	Interproscan
IPR001648 all species →	Family	Small ribosomal subunit protein bS18	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13479 all species →	30S RIBOSOMAL PROTEIN S18	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003735 all species →	Molecular Function	structural constituent of ribosome	Interproscan
GO:0005840 all species →	Cellular Component	ribosome	Interproscan
GO:0006412 all species →	Biological Process	translation	Interproscan
GO:0005763 all species →	Cellular Component	mitochondrial small ribosomal subunit	Interproscan
GO:0032543 all species →	Biological Process	mitochondrial translation	Interproscan
GO:0070181 all species →	Molecular Function	small ribosomal subunit rRNA binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K02963	RP-S18, MRPS18, rpsR; small subunit ribosomal protein S18	-	Ribosome	ko03011	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.