Gene detail

Detailed information of BRAKERLUSP00000021376.1 in Blastomussa wellsi

Genomic Location: not available for this species
NR annotation: CAH3122147.1, unnamed protein product, partial [Porites lobata]
Species abbreviation BWELL · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q6R520	Calmodulin OS=Oreochromis mossambicus OX=8127 GN=calm PE=2 SV=3
O96081	Calmodulin-B OS=Halocynthia roretzi OX=7729 PE=3 SV=3
A4UHC0	Calmodulin OS=Alexandrium fundyense OX=2932 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000122 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13833 all species →	EF-hand_8	EF-hand domain pair	Domain	Interproscan
PF13499 all species →	EF-hand_7	EF-hand domain pair	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002048 all species →	Domain	EF-hand domain	Interproscan
IPR018247 all species →	Binding_site	EF-Hand 1, calcium-binding site	Interproscan
IPR050230 all species →	Family	Calcium-Regulated Muscle Contraction and Cellular Process	Interproscan
IPR011992 all species →	Homologous_superfamily	EF-hand domain pair	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23048 all species →	MYOSIN LIGHT CHAIN 1, 3	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005509 all species →	Molecular Function	calcium ion binding	Interproscan
GO:0016460 all species →	Cellular Component	myosin II complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K02183	CALM; calmodulin	-	Exosome	ko04147	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.