Gene detail

Detailed information of BRAKERLUSP00000021684.1 in Blastomussa wellsi

Genomic Location: not available for this species
NR annotation: XP_022786216.1, uncharacterized protein LOC111326477 [Stylophora pistillata]
Species Blastomussa wellsi · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006223 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03734 all species →	YkuD	L,D-transpeptidase catalytic domain	Domain	Interproscan
PF01471 all species →	PG_binding_1	Putative peptidoglycan binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR038063 all species →	Homologous_superfamily	L,D-transpeptidase catalytic domain-like	Interproscan
IPR036365 all species →	Homologous_superfamily	PGBD-like superfamily	Interproscan
IPR005490 all species →	Domain	L,D-transpeptidase catalytic domain	Interproscan
IPR036366 all species →	Homologous_superfamily	PGBD superfamily	Interproscan
IPR002477 all species →	Domain	Peptidoglycan binding-like	Interproscan

PANTHER

No PANTHER signature was detected for BRAKERLUSP00000021684.1. This gene does have a gene model — the search simply returned no hit.

Gene Ontology

GO term	Category	Description	Source
GO:0016740 all species →	Molecular Function	transferase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K19236	ycfS; L,D-transpeptidase YcfS	-	Peptidoglycan biosynthesis and degradation proteins	ko01011	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.