Gene detail

Detailed information of BRAKERLUSP00000023052.1 in Blastomussa wellsi

Genomic Location: not available for this species
NR annotation: XP_020627855.1, uncharacterized protein LOC110065098 [Orbicella faveolata]
Species abbreviation BWELL · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q2IV68	Ribosomal RNA large subunit methyltransferase E OS=Rhodopseudomonas palustris (strain HaA2) OX=316058 GN=rlmE PE=3 SV=1
Q138J5	Ribosomal RNA large subunit methyltransferase E OS=Rhodopseudomonas palustris (strain BisB5) OX=316057 GN=rlmE PE=3 SV=1
B6JHM9	Ribosomal RNA large subunit methyltransferase E OS=Afipia carboxidovorans (strain ATCC 49405 / DSM 1227 / KCTC 32145 / OM5) OX=504832 GN=rlmE PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007548 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01728 all species →	FtsJ	FtsJ-like methyltransferase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029063 all species →	Homologous_superfamily	S-adenosyl-L-methionine-dependent methyltransferase superfamily	Interproscan
IPR050082 all species →	Family	Ribosomal RNA large subunit methyltransferase RlmE	Interproscan
IPR002877 all species →	Domain	Ribosomal RNA methyltransferase, FtsJ domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10920 all species →	RIBOSOMAL RNA METHYLTRANSFERASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0001510 all species →	Biological Process	RNA methylation	Interproscan
GO:0005739 all species →	Cellular Component	mitochondrion	Interproscan
GO:0008173 all species →	Molecular Function	RNA methyltransferase activity	Interproscan
GO:0008650 all species →	Molecular Function	rRNA (uridine-2'-O-)-methyltransferase activity	Interproscan
GO:0008168 all species →	Molecular Function	methyltransferase activity	Interproscan
GO:0032259 all species →	Biological Process	methylation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERLUSP00000023052.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.