Genomic Location: chr5:4321515...4328974
NR annotation: XP_020619049.1, beclin 1-associated autophagy-related key regulator-like [Orbicella faveolata]
Species Blastomussa wellsi · all data for this species · gene families
| CDS |
| BRAKERLUST00000023436 |
| Transcript |
| BRAKERLUST00000023436 |
| Protein |
| BRAKERLUSP00000023436.1 |
| UniProt accession | Description |
|---|---|
| Q6ZNE5 | Beclin 1-associated autophagy-related key regulator OS=Homo sapiens OX=9606 GN=ATG14 PE=1 SV=1 |
| Q8CDJ3 | Beclin 1-associated autophagy-related key regulator OS=Mus musculus OX=10090 GN=Atg14 PE=1 SV=1 |
| D4A4K3 | Beclin 1-associated autophagy-related key regulator OS=Rattus norvegicus OX=10116 GN=Atg14 PE=3 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0006309 (this species only) · gene tree & orthology |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF10186 all species → | ATG14 | Vacuolar sorting 38 and autophagy-related subunit 14 | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR018791 all species → | Family | UV radiation resistance protein/autophagy-related protein 14 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR13664 all species → | BECLIN 1-ASSOCIATED AUTOPHAGY-RELATED KEY REGULATOR | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0000045 all species → | Biological Process | autophagosome assembly | Interproscan |
| GO:0000423 all species → | Biological Process | mitophagy | Interproscan |
| GO:0005776 all species → | Cellular Component | autophagosome | Interproscan |
| GO:0009267 all species → | Biological Process | cellular response to starvation | Interproscan |
| GO:0035032 all species → | Cellular Component | phosphatidylinositol 3-kinase complex, class III | Interproscan |
| GO:0043552 all species → | Biological Process | obsolete positive regulation of phosphatidylinositol 3-kinase activity | Interproscan |
| GO:0097629 all species → | Cellular Component | extrinsic component of omegasome membrane | Interproscan |
| GO:0097632 all species → | Cellular Component | extrinsic component of phagophore assembly site membrane | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K17889 | ATG14L, ATG14; beclin 1-associated autophagy-related key regulator | - | Mitochondrial biogenesis | ko03029 | deepkoala |
Genes whose expression across the transcriptome samples of Blastomussa wellsi tracks this one. Counts are over the whole network; the network view itself draws at most 100 partners per query gene (CNIDO_NET_TOP_K), so a hub gene can show fewer edges than the number below.
No co-expression network has been built for this species, so this gene has no partners to show. Networks are available for the species listed on the Network Analysis page.
Whether this gene can be visualised in the single-cell atlases of Blastomussa wellsi, and in which cell types it is a marker. Expression is stored per cell, so the violin plot and the cell-type means are computed in the viewer — open a dataset to see them.
No single-cell dataset has been published for this species. The atlases that do exist are listed in the Cell Atlas.
Chromatin and DNA-methylation data covering this gene. Peak calls are listed per sample with the genomic region the peak falls in; DNA methylation is listed as sample availability only, because those tables are queried by the DNA Methylation page itself.
No epigenomic data has been deposited for this species. The assays that exist across the site are described in the Epigenomic Data module.
Every tool below opens with this gene already entered, so you land on the analysis rather than on an empty form. Links open in a new tab.
| Analysis | What it does | Status | |
|---|---|---|---|
| Primer design | Design PCR / qPCR primers on this gene’s sequence with the published primer3 settings. Opens with the primers already computed. | template found | open → |
| BLAST | Search this gene’s sequence against the CnidoSite BLAST databases. The query is filled in and the species’ database is preselected — press Run to start. | template found | open → |
| Expression heatmap | Draw this gene’s expression as a heatmap across all RNA-seq samples, and compare it with the genes you add next to it. | no expression matrix | – |
| Gene family / orthogroup | Look this gene up in the single-copy orthogroups built from the high-quality cnidarian genomes, and see which other species carry an orthologue. | open → | |
| Gene set analysis | Start a gene-set enrichment analysis with this gene as the seed list. Add more genes on that page before running it. | open → |
