Gene detail

Detailed information of BRAKERLUSP00000023967.1 in Blastomussa wellsi

Genomic Location: not available for this species
NR annotation: CAH3040958.1, unnamed protein product [Porites lobata]
Species abbreviation BWELL · all data for this species · gene families

Sequence

CDS

BRAKERLUST00000023967

ATGAGTTCTGGGAGATCCAGAGGTAATGTTTGGAGGGGGAGAGGACAAAGATTCCGCGGCCAGAGGAGAGGCAACAGTGAGCAGACTGGAAGAGgtCAAAGGGGATCAAGCCAGAGCAGCTCAAGACCTCAAATACAACGTCAGAGACCTCGACAGGTGCAGACAAGCTTGACACCCTGTCCTTACAAGAAATGGAATTTGTATTTTCCCGACAGTGTTTACAACCCTGAATCAACTCTTGGAACTAAAGTTCAGGTCATTTCAAAGTTTGTTGAATCACATGCAACCCAACTTTCCAAgGATGAGATTGAAAACAAAGGAGCTGTGGTGTTTGACTATGTGGATCTCACATCTAATCCTGAGCTTGCTGAGGATTTACCATCTCTTGCTGGAGATCTAAGAGATCAGCCAACAGAAATTCTGCAAAGTTTTGGTTTAGCAGTATCACAGGTTCTGTTGACTCTAGTTACAGGAGAAAGTCAACAAGGTGCTCCTATTATTGACTTGCCATACATACAAGCCAGAATAACAAACTTTGAGCCCATCACTCCACTTAAAAACCTCAAGTCCAACTATTTTGGTAAATTTGTCGCAATCCATGGAACAGTGATTAGAGTGAGCAATGTTAAGCCGTTGGTAAAAAAGATGGCATTCTCCTGTAACCTGTGCAGTGAAACACAGGTAATTCATCTTACAGATGGAAAATACTCAATCCCAACTAAAtgtTCATCGGCGGATTGTCGTGGCAGATCCTTCACTCCTGAGAGAAGCTCACCAATGACAGAAACCATTGATTGGCAAACAGTTAGAGTTCAGGAAATTATGGATGATGATCAAAGAGAATCTGGAAGAATTCCAAGAACTGTGGAGTGTGAATTGACAGCTGATCTAGTGGACAGCTGTGTGCCAGGAGACATGGTGACCATTACTGGCATCGTCAAGGTTACGAGCACAGAGGAACATCGCAAAAAGTACAACAAAGACAAGTGTATGTTCCTGCTATACCTTCATGCTAATGCCGTAAATAATAACAAGGGTGGAACCAGCAGTGGAGACCAGCAAGCCAGTGGACTGGCCATGGAATTCTCAATCAAGGAACTGTATGCCATTCAAGAAATTCAGGCACAGGCAAACTTGTTCCGATTAATTGTTGGATCTCTCTGTCCTTCCATCTATGGACATGAGATGGTGAAAGCAGGTCTGGTGTTAGGACTATTTGGAGGAACTCAAAGATACCTGAATGACAAGAATCGCATTCCAATCAGAGGCAATCCACACATCCTAGTAGTTGGGGATCCAGGATTAGGGAAAAGTCAGATGCTTCAGGCAGTATCTAACATTGCTCCTAGAGGTGTGTACGTCTGTGGAAATGCAACATCAACTTCTGGACTCACGGTGACACTGACTAAAGAAGGTTCCTCAGGTGATTATTCACTGGAGGCTGGAGCACTTGTTTTAGGAGACCAAGGGTGTTGTTGCATTGATGAATTTGACAAAATGGGAAGTCAGCATCAGGCTTTGCTGGAAGCAATGGAGCAGCAAAGTATTAGTATCGCAAAAGCTGGTGTTGTTTGCAGCTTACCAGCAAGGACATCCATCCTTGCTGCTGCTAACCCTGTGGGTGGTCATTACAACAAAGCAAAGACTGTGTCAGAGAACCTCAAGATGGGAAGCGCTTTATTGTCCCGCTTTGACCTTGTTTTCATTTTGTTGGACAAGCCAGACGAGGAAATGGATTCCATGTTGTCTGAACATGTCATGGCCTTACACGCTGGGAAAGGGGAATGTGCATTTGGCATAGCCACTGCAAGACGCCGTTCAAGAGAGGGCAGCGGCAGTGACGAGGAGGAGATGAGAAGGCAATGGGAAGCAGATAAACCGCTCTCTGAACGACTGAAGATCGGTCGAAATGAAGAGTTTGATGCTATTCCCGGCCCGCTGATACGAAAGTACGTGGGTTACGCCAGAACGTATGTTAATCCTAAACTTACACCCGCAGCAGCCGAAGTATTGCAGGGTTTTTACCTGGACTTAAGACGTCAGCACCACAGTGCAGACAGTACTCCAATCACCACCAGACAGCTAGAGTCGCTCATAAGACTCACTCAGGCTCGGGCGCGGTTGGAGATGCGCGAGAAAGCCAGCCAGCAGGACGCGCAAGATGTGGTAGAGATTATGAAATACAGCTTGCTCGACACATTCAGTGACGATTTTGGGAGCCTGGATTTTCAACGGTCACAGCATGGATCTGGAATGAGTAACAGAGCGCAGtcCAAATGCTTTGTTGCTGAGCTGAGCCGCGTATCAGAAAGGGAATACAATTCTCTTTTCACTGTTGAACAAATGAAGAGAATAGCCAAGGACCTACGACTGCAGATTCGTAGCTTTGACGACTTCGTTTACTCGCTGAACAATCAAGGTTTTTTACTGAAGAAGGGTCCTAGAGTCTATCAACTTCAGACCTCAAGCTGCTTGTGA

Transcript

BRAKERLUST00000023967

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
I0IUP3	DNA helicase MCM8 OS=Gallus gallus OX=9031 GN=MCM8 PE=1 SV=1
Q9UJA3	DNA helicase MCM8 OS=Homo sapiens OX=9606 GN=MCM8 PE=1 SV=2
Q5F310	DNA helicase MCM8 OS=Xenopus laevis OX=8355 GN=mcm8 PE=2 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003634 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF17207 all species →	MCM_OB	MCM OB domain	Domain	Interproscan
PF00493 all species →	MCM	MCM P-loop domain	Domain	Interproscan
PF17855 all species →	MCM_lid	MCM AAA-lid domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR033762 all species →	Domain	MCM OB domain	Interproscan
IPR031327 all species →	Family	Mini-chromosome maintenance protein	Interproscan
IPR001208 all species →	Domain	MCM domain	Interproscan
IPR003593 all species →	Domain	AAA+ ATPase domain	Interproscan
IPR012340 all species →	Homologous_superfamily	Nucleic acid-binding, OB-fold	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR041562 all species →	Domain	MCM, AAA-lid domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11630 all species →	DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000724 all species →	Biological Process	double-strand break repair via homologous recombination	Interproscan
GO:0003677 all species →	Molecular Function	DNA binding	Interproscan
GO:0003697 all species →	Molecular Function	single-stranded DNA binding	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0017116 all species →	Molecular Function	single-stranded DNA helicase activity	Interproscan
GO:0032508 all species →	Biological Process	DNA duplex unwinding	Interproscan
GO:0042555 all species →	Cellular Component	MCM complex	Interproscan
GO:0016887 all species →	Molecular Function	ATP hydrolysis activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K10737	MCM8; DNA helicase MCM8	EC:5.6.2.4	DNA replication proteins	ko03032	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.