Gene detail

Detailed information of BRAKERLUSP00000023993.1 in Blastomussa wellsi

Genomic Location: not available for this species
NR annotation: CAH3128961.1, unnamed protein product [Pocillopora meandrina]
Species abbreviation BWELL · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P29374	AT-rich interactive domain-containing protein 4A OS=Homo sapiens OX=9606 GN=ARID4A PE=1 SV=3
F8VPQ2	AT-rich interactive domain-containing protein 4A OS=Mus musculus OX=10090 GN=Arid4a PE=1 SV=1
Q8IN94	Trithorax group protein osa OS=Drosophila melanogaster OX=7227 GN=osa PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006047 (this species only)
Transcription factor family	ARID · all TF in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08169 all species →	RBB1NT	RBB1NT (NUC162) domain	Domain	Interproscan
PF01388 all species →	ARID	ARID/BRIGHT DNA binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR051232 all species →	Family	AT-rich Interactive Domain/SWI1 Chromatin Remodeling	Interproscan
IPR001606 all species →	Domain	ARID DNA-binding domain	Interproscan
IPR012603 all species →	Domain	ARID4A/B, PWWP domain	Interproscan
IPR036431 all species →	Homologous_superfamily	ARID DNA-binding domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13964 all species →	RBP-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000976 all species →	Molecular Function	transcription cis-regulatory region binding	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0006357 all species →	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0003677 all species →	Molecular Function	DNA binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERLUSP00000023993.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.