Detailed information of BRAKERLUSP00000024956.1 in Blastomussa wellsi

Genomic Location: chr6:21291610...21296927
NR annotation: XP_020614464.1, integrin beta-PS-like [Orbicella faveolata]
Species Blastomussa wellsi · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P11584Integrin beta-PS OS=Drosophila melanogaster OX=7227 GN=mys PE=1 SV=3
P07228Integrin beta-1 OS=Gallus gallus OX=9031 GN=ITGB1 PE=1 SV=1
P53712Integrin beta-1 OS=Bos taurus OX=9913 GN=ITGB1 PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000791 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07965
all species →		Integrin_B_tailIntegrin beta tail domainDomainInterproscan
PF08725
all species →		Integrin_b_cytIntegrin beta cytoplasmic domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR012896
all species →		DomainIntegrin beta subunit, tailInterproscan
IPR014836
all species →		DomainIntegrin beta subunit, cytoplasmic domainInterproscan
IPR015812
all species →		FamilyIntegrin beta subunitInterproscan
IPR036349
all species →		Homologous_superfamilyIntegrin beta tail domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10082
all species →		INTEGRIN BETA SUBUNITInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005178
all species →		Molecular Functionintegrin bindingInterproscan
GO:0005925
all species →		Cellular Componentfocal adhesionInterproscan
GO:0007160
all species →		Biological Processcell-matrix adhesionInterproscan
GO:0007229
all species →		Biological Processintegrin-mediated signaling pathwayInterproscan
GO:0008305
all species →		Cellular Componentintegrin complexInterproscan
GO:0009986
all species →		Cellular Componentcell surfaceInterproscan
GO:0016477
all species →		Biological Processcell migrationInterproscan
GO:0033627
all species →		Biological Processcell adhesion mediated by integrinInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for BRAKERLUSP00000024956.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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