Gene detail

Detailed information of BRAKERLUSP00000025623.1 in Blastomussa wellsi

Genomic Location: not available for this species
NR annotation: XP_020608543.1, uncharacterized protein LOC110047141 [Orbicella faveolata]
Species Blastomussa wellsi · all data for this species · gene families

Sequence

CDS

BRAKERLUST00000025623

ATGGATTCTACTTCAGTTATTACAAAGGAAACTACGAATTACTTCCGTTTGTGTCGCCTTCTGGTTGACGTGGGAAGCCAGGTTCTTAGAGAAACCTTCGATAAAATACACCCTCCGGTTCGGCTCCATGCTACATTATCAAGCCATCCTGTTCGAGCCCGCCTGGAATCGCTGTACAAAGGAAGGCACAAGATCCTTAACCCAGCGCAATGGGAGAAACTGTACCCTTCCTACTCCTCACCGGCGTCATCAGAAGATTTTGACGTCACACTGCTGATGATACTTTTGAGGAACATTTGCTGGTTGCATCCTCCTGACACTGGTTGGAACAATCTTCCTGCTGCAGCGGACAAGAGCACTGAAGCTGACATCGCTCGAGTGATGTATTACAGAAACTCGATATACAACCATGCTAGCCAAGTGACTATTGACGACATGACGTTTGGTGAGTACTGGCAGGCTATCCGTCAGACATTACTTCGACTTGGCGGAGAGCGTTACGGACCTTTCATCGATGAGCTGAAGGCTGAATGTTTGGAGCCTGACATACAAGAACACCATCGAAAACTTTTGAAGCAATGGGTAGAATACGAAACCGTCATTGAAGAAATGGAAGGAAATTTGGGCTGTTTGTATGCGCAAACCATTGATATTTCCCTTCTGGAACCTCCTGTGGATTTTAAATCATCTTCAAACTATTTGGCTCAAAGACTGAGGGCCTTGATAAGATCATTGAAATTTTGGAGGAAACCCAGTGTCTATCCAAGAATATCTGCATGTCAAAGGAACATAGGTTCGATGAACCAGGAACTGGCTTCTGCGAAAAGCGGGATAAGTCGAGTGCCGGAGGAAATGTGTCTCTCTGACGAGGAATCTAGAGTGACCAAAGAGGTAATAACACTACTGGAGGAGGCAATGGACTTCCACCAAAGCGATCATATCGCAGAAGCGCGTGGCAACCTTCGGAATGTTTTCCAAATCGTGTTGGACGTAAAGCAACGTGTTTTCAAGATTCCAACCACACACGGCTTGACAATATTAAGTCGTGGAAAAACTATCTTTCTGGAGGACGGCGTCAGTTGTTCAGTCAAACACGGAACTTTATTGTTGGATTCAAGTAATTCTGGAGCACAGTTTTACATTAGCTTGTTAAATGTTATTGGTGCTTTCGCAGTGGTTATCTCAGAGTTCAAAATTGCTAAGGAAATATTTTCACGGCTCATTGATTTGCATCAGACGTCAGATGCAACTAGCCGCAGGCGCGACTTGGgggctgcttacaataacagaGGCTGTTTATTATTAATACTGGGGAATTTTAAACAAGCAGAGGACGATTTTAAGACTGCGTTGAAACATCTGGATTGCGAGGAGCGTCGTCAACAGTACAGTTTGCTATTGGAAACAATGTTTATGGCAGTAACTTGCAACATTGCTCGTTTATGTCTTCTTTCTAGAAATTTTCTTGAGGCCCTTGAGAAGCAAGACGAGTTAGTCAAAAGATGCCAATGTAAGGAAGTACAAGAACTGCCTCTTCAACTTGTATTCACGGTGCTTAATAACCAAGCAGTGTTGTGCACTACTCTCGGAAACTTCAACAAAGCAGAGCAGGAATTGAAATGGTTGATTTTGTACTGCTATAAAATGAACAGAGAAGATTGCGAGTTTCTTCTAAATTTCGTATCGCTGCATCTTTCGGAAGTGCTGCTGCTTCATGGGAAAGCAAGGGAAGCCGAAAAGGCATTTGGGCTTGAGGAATTGAAATCAGCTGATGGCATAGAACTTGTGCAGATGTTTGGGGGGCTTCACATCAATGTAAGGATTGAAGCATTGGAGAAGCTGGTAGATGTGATAGTCCTTAAAGGAAAAATCAGATTTGCTTGCGAACTTTTGGAAACAGGTGTGAACATTCTCAAGACTAGTTTTGGACACGACCATTTCAATGTTGCTTCGCTGCTTTATAAGCAAGGAACGATGCTAACTCGCACTGGTGATGTCTCTACCGCGGCCGAGAAATTCAAATGCTCCATTGACATCTTGCAAGCGATATTCGGCGTAAAGCATCCCCTTCTTCTTAATTGCTACATGTCTCTTGGTGACCTGGCTTTGAGATTGGATCGTACAGACGATTCATACCTTTATTTTCAGAGGGCCATGGAAAACATAGAGGAACTATACCAAGTGTCTTTTGTAAGTGAATTGTCCGGCAAATATATGGAAATAGCAGGGAACCTCAAACTCGTTCAAAGAAGCACAGTACTGAACGATTCCTGTAAGGTTGAAGGCCTGGTAGCTGAGCATGGGTTGGCATTTGCTGTTTTACTTTCGCGAGTGACTGTCCAGGGGAACAACCGTCCTTTGAAAAGATGGAGACGAAGGCAACAGCCACTCACAGCAACAGACTCCATGAAGATAGTTTCCCTGAAATGCACACGCGACTTTTTACAGAGTGGACAAACCTTTCTCTGTCTAGGTATGACAAAGGAAGCCGCTACCTTTTTTCAGCAAGCCAGGAAGTATTGCCCAGCATATCTTATGGTAAAAGGGTCTCCTAAACTATGTCTCGCACGTTTATTCAGCGTACTCACCGAGAAAAGAGTTGAGGCCAATAACCGTGATTTGATGGACTACTTGGAGGATCTTGATGAAATCACGAAAACAGTAATCGCTGATAGTAGCTCCAAAAAAATCACAGGAGACACAGTGATTGGAATTTCTGACTGCCAGTACAACTTGAAGCTTGTGTTGATTTTCCTCATTTTGTTTTCGATTGAGCTGAAAATGCTTGATGCAGTTTTTAAAGCGTACGATCTGTTTGCAAAACTGTCTTTTATCGACGACAGTTCCCTGTATTACATTAATGGGGGAGTTCAGGTTTTTGCATCAAGAACGTTAATCACCTGCAATGGTAAGACGGCTGTACAAGACGTCCTTGTCTCTTCCACTGTTGGTTTGTTGGATACCGACTGTCCCCTTCCTGGCCAACAGTTGTTCAGGAATTTAGTCTGCAGGGACAAAGTGCCAACCGACAGTTTTTTGGTGATTTGCAATTCGTCAACTCTTCTAGATATCAATGCCTTTCGGGTACTAGAACGGAAAATATCCTTTTCAGTCCAAGAGTGTTTTCAACTGAAGTGCTTTGAAAGTGGAATTGAAGGCAATGCAACTCAAGTTGTTGTTGATCTGACCACGACGCCAAACGGTAAATACGACAGCGTGGCAACTTCTAGAAAAATTGAgcttttgtctctttgtttatcAGAAGAAATCAGCACTCAATCAGCACAAGTTTCTCACGGAAGAAATGTTTCTGACATTTCAACGGTTATGTGTGAGAAGACCACATGCTTGACCTTTGAAGATGAGCAAACAAGCTCTTTCATGTTCAGCAAAAATGCTCTCTCCCTTATTCATCAGTTTAACTTGGGACAGATTTCAACGCTGTCGTTGCAAAGTCAGAGCGTCTCCATGACGATTATCCATCCAGTTAAAGCGCGACTGACGCTGTGGCGTATGGATCAATGCATCAAACAAAAAATTCAGCTTCTACAAGCAGCAGTAACAGGAGCAGCCAGGAATGGCCGAACAGGTTTGACATTGCGCCAGCAGACGTTTTGTAAAGAAGCAGTAGAAAACTTCAGTGCAGCTGATAGGATGCCTTGGCCAGTCATTGATCACTGGGCAAAAGCGTATCACGTAAAATTCGTGAGCGATGATGTCAACTCCGATGAACCACTGGACGTCTCTACCGTGTACCATCAACGAAATGGGGATATCTTTGATTGGATGCATGGGAAATGTGTTCAATTTCCCAGCCAGGAAACTGAACAGAATGAAACACTGAGAATCTGCCTAAATAAGGCTGTTCTAGAAGGCTTATCAGCCATCAGTGACATATCGCGACAGCTCGATGGTGATGGATCAAAAGAAGACGGTGTCATGGAGGTGGTTCCTGACAGGACAGAAGGAAGTAGTCTACCCTGTTCTCCTCGAAATCAGTTGCAACCAGAAGGCATTTCCAATAGTTTtcagcaaacaaactttaattCTGAATGTGAGACAGAAAGCCACCGTAATTCAACGCTGGAGGAGTCAAACCTGAGAGATGTAGAAGAGGAGCCATgtacaagtcaagaaaattccATAACCAGGTCAGAAGATGACGATAAGGAGCTGGGGAGAACTCTTTTTGAGAAGGATCGAAGATCAAGACGTTCTTTCATTGCCCAGATGCACGAAAGTCTGAAGATAAAAGGCGCCAAAAGCAATGAAGAAGCGATACAGAAAGATTTTAGCGCTGTGATTGATCTAAAAAAAACAGGGATAGACCATACAGCCAAGTCAGATAAAATTGAAACAAGCATGGAGATCACTCACAGTGGCCTTGAGCAATCGGCTTTTAATGCTGAAGCTGAATTAGAGACCCCAAACTCATTTGAACGGAAGCTACATGACGGAAAATCAACAGCAACAAGCATCAAGAGCATTGCCAAGTTAAAAGAACCAAAGATCGAGGAAATATTGCACAAATCGAATATTCTGGGGAATGAAAATAAGCCAGCTTGCAAGGAAACGCATGTAAAACAAGACTCTGTAGCAGACCCACATTATGACGAAGCGCGAGACGTGCAAAGATGTCTCCCTGGAGAAGGTGCCAAAGGGGCGCAAGAAGACAACAAACAAAATATCGACACCACTGCGGACAGTTTATCACCTAAATACGAAGCAGAAGATGCGACAATAGTTAATCTATGTCAGCCAGGAGCATCTTTCTATACTCACGATCAAACTGAACATCAAAGCCGATGCAGTCGGCAAGAACTTCATAAAGCAAGACATAACACTGCAGGGTATGAGGAAATTGATGAAGAAAGCTACCAAACTGAAGAGTTTCCAAACTACAGCACGCAACAAAAATATGGTGAAGAGCTAAATGAAAACATCGGGGctcaaaataaatcaaagatCGAGGAAATATTGCACAAATCGAATATTCTGGGGAATGAAAATAAGCCGGGTTACAAGGAAGCGCCTGTAAAACAAGACTCTGTAGCAGACCCACATTATGACGAAACGCAAGATGTTCAAAGATGTGTCCCTGGAGAAGGTTCCAAAGAGgcacaagaaaacaacaaacaaattaTAGAAACCACTGCGGACAGTTCATCTCCTAAATACGAAGCAGGTGCGACAACAGTTAATCTACGTCAGCCGGGAGCACCTTTCTCCACTCACGATCAAACTGAACATCAAAACCGAAGCAGTCGGCAAAAACTTCATATAGCAAGAAATCACCCTGCAACGTATGAGGAAATTGACGAAGAAAGCTACCAAATTGAAGAGTTTCCAAACTACAGCAcgcagcaaaaatatggagaaGAGCTAAATGAAAACATCGGGGCTCAAAATGAATCACTGGGGAATAAAGGAATTTCTGCCCCCGTTTCGCGTGCTAATATGACAAACAGAAGAACTCCAAAATCATTATTTGAGGTGAATGACGACGTAATTCCTGACGGGCCTGCCAATGAAGCCTCTAAAAGAATTCAGATAAATGCTAACGACTCAAAGTCCTTGACAAAGACGGATATTGTCCACAGGCCCTTAAAGAAAGTTGTGAAAAATCTCCATATTGAATCAGAACGCTTCCCTGACAACGAGACCCTTGGGCGACGTCACGTGGACGATAGCTGCAGCACAGCATTGCAAAATGGAAGACCAAGCCCTGAAAATTCTCAATTTTTCAACACCCTTGGGCGACGTCACGTGGACGATAGCTGCAGCACAGCATTGCAAAATGGAAGACCAAGCCCTGAAAATTCTcaatttttcaacaaaaatcTAAAGAAAAATGTCCGAAATCCACTCCTTAGATTTTTTGGTGGTGATGTCCTTGTTGACGGCGAAAGCAACAGATCGTCccatgaagaagaagaagaagttgtAGACGGTCCATTACCCAATGAAACAAGAGTAGGCATTCGTGGAAGCGACACAATGAAGTCATGTCAAGATGGCAGCAAGAAGGAAGTGAGTGGAAACGAAACTGTATCATTTCCGTTATATGCTGCAAGAGATGTGATCGATGCTCCGGGCTACACACCTAAGAGTGCTACTACGGTCACTGATAATCCTTCAGGCTATGGAGGAGCTAGGCCGAAAGAAATAGTGACAAATGACACAAATCGAATTTCGTCTAGTGAGACTAGGAAAACTAAATCAATATCAGCTTATCAGCGAGACGAAACAGAAACGCTGGGTATTTATCCTCGTTTTTTGGCACATCACACCGTAAAGAATAATGGAGCAGTATTGGAGGCACCATTGCAAGACGGTTTCGATGAACCTTACTTCTCAGGTAAAGCTACGATCTATGGCGAGAACCTGAAATCACCCAGGGGAGATTTCACCTCAGACTACACCTCTAACGGTAGTAGTTCATTCTTTAATGTGGAGGAAGCGTGTACAGCCATAATCTCGACCCGTGGTAAAGTTCAGTCGCTTGTCAGCCACTCGAAACCTCAATTctatcaaaagaaaaattcgCAATTTCTAACTCCGAGATCCGATGATTCCCTTGGAATGCAAAGTAATGGCTACGACGATTCTGTTCGCTCAGGTGTTAGAGCACTATTTAGCAGCCATGGGTCACGAAATGCTTACAATCAAATGGATTCAATGACGAATGACTACCACAACAGCATAGGTGACAAAGGGGAAGCACAATCACCTATAGAGAGTGCTGGTCAGCCATCATCGACGGAACAATCTGCTTCATCCCTTCTCGGAAGTCTTCAGCAGGTAATTGCCAAAACCGTCAGACTTATTGCCTCGAATGATACGGCTGGGAAAAAGCTTCACCAAGATCCAAAAGCAGTTGAAAAGATCGGCATACAGGAAGAAGGAAGAGAAGATAGAGAGCAGGAACAAGCTGTAACAGCAGTAGCCGAGGATTCAAGGAATCAAGAGGACTCTACCCAAGAAAATAAACAGGTCCTTGACACTGAAAACCAGCGCATATCTGCACCCGTACAGGAAAGTCCCCGGCCTGTATGCAGCCACTATCAGCGACGCTGTTTGGTCAGGTTCCCATGCTGTGGGAAGTTCTACCCCTGTCATCGTTGCCACAATGAGTCGGAAGATTGTAGTGATGATCAAGCAAGAGCCATCAATGCTACTCACATAAGATGCACCATCTGTTACCATGAGCAAGTGATTAATGAACAAAGCCAAAACTGCAGTGAGTGTAAATCCCAAATGTCTGAATATTTCTGCCCCATCTGTAAGCACTTTACCTCGGTTGACAAGAATCCATTCCATTGTGATAAATGCGGTATCTGCAGGATACATAGCGACAGATCTTTCCATTGTGACGTGTGTAACGTGTGCCTGGACAAACGTCTACAAGGCAAACACAAGTGCAGGCCAGACTCTGGACATGACGAATGTTGTATTTGTTTGGAGGACGCCTTCAGTGGCTGCCAAATTCTTCCTTGCTCACACAAAGTCCACAAAGACTGCGCAATAGCAATGATACAAAATGGAGTACGCTCATGTCCAATTTGCCGCCATCCGTTTTTCAGCCAGCCTCAAGATAGTACACAGTGA

Transcript

BRAKERLUST00000025623

Protein

BRAKERLUSP00000025623.1

MDSTSVITKETTNYFRLCRLLVDVGSQVLRETFDKIHPPVRLHATLSSHPVRARLESLYKGRHKILNPAQWEKLYPSYSSPASSEDFDVTLLMILLRNICWLHPPDTGWNNLPAAADKSTEADIARVMYYRNSIYNHASQVTIDDMTFGEYWQAIRQTLLRLGGERYGPFIDELKAECLEPDIQEHHRKLLKQWVEYETVIEEMEGNLGCLYAQTIDISLLEPPVDFKSSSNYLAQRLRALIRSLKFWRKPSVYPRISACQRNIGSMNQELASAKSGISRVPEEMCLSDEESRVTKEVITLLEEAMDFHQSDHIAEARGNLRNVFQIVLDVKQRVFKIPTTHGLTILSRGKTIFLEDGVSCSVKHGTLLLDSSNSGAQFYISLLNVIGAFAVVISEFKIAKEIFSRLIDLHQTSDATSRRRDLGAAYNNRGCLLLILGNFKQAEDDFKTALKHLDCEERRQQYSLLLETMFMAVTCNIARLCLLSRNFLEALEKQDELVKRCQCKEVQELPLQLVFTVLNNQAVLCTTLGNFNKAEQELKWLILYCYKMNREDCEFLLNFVSLHLSEVLLLHGKAREAEKAFGLEELKSADGIELVQMFGGLHINVRIEALEKLVDVIVLKGKIRFACELLETGVNILKTSFGHDHFNVASLLYKQGTMLTRTGDVSTAAEKFKCSIDILQAIFGVKHPLLLNCYMSLGDLALRLDRTDDSYLYFQRAMENIEELYQVSFVSELSGKYMEIAGNLKLVQRSTVLNDSCKVEGLVAEHGLAFAVLLSRVTVQGNNRPLKRWRRRQQPLTATDSMKIVSLKCTRDFLQSGQTFLCLGMTKEAATFFQQARKYCPAYLMVKGSPKLCLARLFSVLTEKRVEANNRDLMDYLEDLDEITKTVIADSSSKKITGDTVIGISDCQYNLKLVLIFLILFSIELKMLDAVFKAYDLFAKLSFIDDSSLYYINGGVQVFASRTLITCNGKTAVQDVLVSSTVGLLDTDCPLPGQQLFRNLVCRDKVPTDSFLVICNSSTLLDINAFRVLERKISFSVQECFQLKCFESGIEGNATQVVVDLTTTPNGKYDSVATSRKIELLSLCLSEEISTQSAQVSHGRNVSDISTVMCEKTTCLTFEDEQTSSFMFSKNALSLIHQFNLGQISTLSLQSQSVSMTIIHPVKARLTLWRMDQCIKQKIQLLQAAVTGAARNGRTGLTLRQQTFCKEAVENFSAADRMPWPVIDHWAKAYHVKFVSDDVNSDEPLDVSTVYHQRNGDIFDWMHGKCVQFPSQETEQNETLRICLNKAVLEGLSAISDISRQLDGDGSKEDGVMEVVPDRTEGSSLPCSPRNQLQPEGISNSFQQTNFNSECETESHRNSTLEESNLRDVEEEPCTSQENSITRSEDDDKELGRTLFEKDRRSRRSFIAQMHESLKIKGAKSNEEAIQKDFSAVIDLKKTGIDHTAKSDKIETSMEITHSGLEQSAFNAEAELETPNSFERKLHDGKSTATSIKSIAKLKEPKIEEILHKSNILGNENKPACKETHVKQDSVADPHYDEARDVQRCLPGEGAKGAQEDNKQNIDTTADSLSPKYEAEDATIVNLCQPGASFYTHDQTEHQSRCSRQELHKARHNTAGYEEIDEESYQTEEFPNYSTQQKYGEELNENIGAQNKSKIEEILHKSNILGNENKPGYKEAPVKQDSVADPHYDETQDVQRCVPGEGSKEAQENNKQIIETTADSSSPKYEAGATTVNLRQPGAPFSTHDQTEHQNRSSRQKLHIARNHPATYEEIDEESYQIEEFPNYSTQQKYGEELNENIGAQNESLGNKGISAPVSRANMTNRRTPKSLFEVNDDVIPDGPANEASKRIQINANDSKSLTKTDIVHRPLKKVVKNLHIESERFPDNETLGRRHVDDSCSTALQNGRPSPENSQFFNTLGRRHVDDSCSTALQNGRPSPENSQFFNKNLKKNVRNPLLRFFGGDVLVDGESNRSSHEEEEEVVDGPLPNETRVGIRGSDTMKSCQDGSKKEVSGNETVSFPLYAARDVIDAPGYTPKSATTVTDNPSGYGGARPKEIVTNDTNRISSSETRKTKSISAYQRDETETLGIYPRFLAHHTVKNNGAVLEAPLQDGFDEPYFSGKATIYGENLKSPRGDFTSDYTSNGSSSFFNVEEACTAIISTRGKVQSLVSHSKPQFYQKKNSQFLTPRSDDSLGMQSNGYDDSVRSGVRALFSSHGSRNAYNQMDSMTNDYHNSIGDKGEAQSPIESAGQPSSTEQSASSLLGSLQQVIAKTVRLIASNDTAGKKLHQDPKAVEKIGIQEEGREDREQEQAVTAVAEDSRNQEDSTQENKQVLDTENQRISAPVQESPRPVCSHYQRRCLVRFPCCGKFYPCHRCHNESEDCSDDQARAINATHIRCTICYHEQVINEQSQNCSECKSQMSEYFCPICKHFTSVDKNPFHCDKCGICRIHSDRSFHCDVCNVCLDKRLQGKHKCRPDSGHDECCICLEDAFSGCQILPCSHKVHKDCAIAMIQNGVRSCPICRHPFFSQPQDSTQ

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q10LI1	E3 ubiquitin-protein ligase SRFP1 OS=Oryza sativa subsp. japonica OX=39947 GN=SRFP1 PE=1 SV=1
Q8VZK0	E3 ubiquitin-protein ligase MIEL1 OS=Arabidopsis thaliana OX=3702 GN=MIEL1 PE=1 SV=1
Q86Y13	E3 ubiquitin-protein ligase DZIP3 OS=Homo sapiens OX=9606 GN=DZIP3 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006692 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF18738 all species →	HEPN_DZIP3	DZIP3/ hRUL138-like HEPN	Domain	Interproscan
PF13424 all species →	TPR_12	Tetratricopeptide repeat	Repeat	Interproscan
PF05495 all species →	zf-CHY	CHY zinc finger	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR041249 all species →	Domain	DZIP3-like HEPN domain	Interproscan
IPR013083 all species →	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR037275 all species →	Homologous_superfamily	Zinc finger, CTCHY-type superfamily	Interproscan
IPR019734 all species →	Repeat	Tetratricopeptide repeat	Interproscan
IPR008913 all species →	Domain	Zinc finger, CHY-type	Interproscan
IPR011990 all species →	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR037274 all species →	Homologous_superfamily	Zinc finger, CHY-type superfamily	Interproscan
IPR001841 all species →	Domain	Zinc finger, RING-type	Interproscan
IPR017921 all species →	Domain	Zinc finger, CTCHY-type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21319 all species →	RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0008270 all species →	Molecular Function	zinc ion binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERLUSP00000025623.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.