Gene detail

Detailed information of BRAKERLUSP00000026593.1 in Blastomussa wellsi

Genomic Location: not available for this species
NR annotation: XP_020623229.1, mucin-2-like, partial [Orbicella faveolata]
Species Blastomussa wellsi · all data for this species · gene families

Sequence

CDS

BRAKERLUST00000026593

ATGAAGTGCTTGCCTGTTTTTCCTGTGGTTTGCGGTGTGGTGCTGGCTCTGTTACTTGCCGCAACAGGTTACGCCGAAACGCAGTCACAAGAACAAGTCTTAGGATTTTTGGACGAATTGGACAGACTTGCAGATCCAAATTTTGGTGCCAGCAACAAAGGACATTTCTGCACGTTCTACGAGCCTCGTTTAATACGCACAGCTGCAGACTACAAGAGGAGGACTGTAAAAAGCTTCCAAGTACCGTGCGCGAGGGGGGAAACGATTAGACGGTGTAATAAATACAGGCTGGTATTTGAGCCCGCGGTCCGCGATGTGACCAAAACAGTACTGAGGGGGGTACAGAGGTGCTGCAAAGGGTGGAAAGGCATCAACTGCAATCAACGTGACGAAGAGGAATCTTTAAACGAGAAAAGACAGCTTGTGGATTCAAATTCATCTGCTCCCATTCAAGAAGAGAACAAATGTTGGAAAATTAACGTAACCATCGCGTATGGAAGAACTTTGCTCAATAACGTCACCGTCACTAGTAACCAGGCCCTAAGGGTGATGAAGACGCTCTCTGGCGCTGCCAGGGCTGGGCTCTACTTGTGTCGAGATGTAACGGTAAAATTGCGTGACGTACAAGTTATGGACGGAATCAACGTGACATTAGTAACGGGAGTGTTCCACCTTGTACCAAAGCTTCCCGGATCCAAATCTCTTTCAAGCAGTGCTATAAACTGCGTCAAACGAGCTGGGATTTTCATGGATTTGAAAGCTCAACCCGCGCGTAATGCGCCCAAAATTGTCGGCGGTTACTCGGCTACTGCAGCTGTCGTGACGTATAACATGAAGGGATTGTGCTGTGGGGACGGCCTGGTTGAGAGCAGTGGTATCTGCGTTCCTTGTGTCGCTGGCTCGTACCATGATGTACACGCTGAAAAGTGCATTGGATGCCAGGATAATACTTATCAGCCATATGATGGACAAACGTCCTGCTTGGCATGTCCTAATGGAACTATTGCTGATGGAGTGAACGCTACCAAGTGTACAAGGACATGTTCTCCATCTTGTCAAAATAATGGTTTATGTTCGGACGGTGTATGTTTCTGCTCGTCTGGTTACACTGGAAAATCTTGTGAACGAGCTATTTGTGTCCCGAACTGTTTGAATGGAGGTTTTTGTGTAAAACCCAACCATTGCGCATGTCCAAGTGGGTGGACCGGAACGAGGTGCAACATAGCCCTGTGTTCAAGCCCCTGTGAAAACGGTGGAACATGCGTGGCGCCTGACACGTGTATTTGCAGGCCTGGTTACAATGGATCCACGTGCAAAACAGATTTCTGTGATCCATCTTGCAGTAATGGCGGAACCTGTGTGGCTGGAAATTGCTCTTGTGCATCAGGTTGGAGTGGAGACCACTGTCAAACCCCAAATTGTCTCGCTGGTTGTGCTAATCGTGGAACCTGTGTCGCCCCCGAGGTGTGCGCATGCGCTCCTGGTTTCACTGGCTCTCAGTGTCAGTTTGCAATATCGTTCTGTTCCGGCTTGCCGGATGGTAACTACAAAGATCCTAACAACTGTTACGGTTTCATATCATGTTCAAATGGCTTAACCTACAAGATGGACTGCCCGGCTGGCTTGAGATATAACTACACCATTAATCAATGCGATTGGCCTGCTAATGTGCCATGTGGCCAAGTTCCCCGTGGTGCCATGAACGAACCAGAACTCTGTTTCACGTGGCGATCACATGTAAAAACTTTCGACGGCCGGTACATTTACTTTCCAGGCCGCTGTACATACAAACTGATACACGACTGCCAAGATGACTTGTTCTCTGTTCACGTGTTCACCGATCCTTTGTGTAATGATCTTAAAAACTGTCGTCGCGCGGTCAATTTGTACCTGGGAGGACTTGACATTAAGATTCATTTAGGAGAACGCGACCAGGTTGAAGTAGGTGATAAAAATGTCTCACTTCCTCACATCGTAAACAACGTTGTCATCGAGAAAGTCTCCAGCTATGTCGTCACGTATGGCTACAACGGAATAACAGTATTATGGGATGGTATTGACGCGGTGTACGTTCAtgtctcagccaatcacagGAACAGGACGTGTGGCTTATGCGGCAACTACAATGGCTTCCCGGATGACGACATCATGACGTATGGTGGTCAACGGGTTTCTTCTATTGCCAAATTTGGAAATAGCTGGCGCATGACAGAAATTAATGATTTCTGCCCCAACGTGCGAGAAGAAGAGACCAAGAGTCCCTGCCGTTTGGTAACGCAAGGCAATATGACTCAGATTCAAAGCATCTGTTCCTACTTGCGTAACTCGACGTTTTATCTCTGTCACGTGACACTTGACCCTGCGCCGTTCATAAAGATGTGCGAAGAGGAACTCTGCAGGTGTAATTTGACTGATCATCTTGACTGCGCATGCTCTGCTTTTACGCAGTACTCACGAGCGTGCGCACGGAATAAAGCGCCCATTCAATGGCGAACACGTGACTTGTGCCCTGTGACGTGTCCAAAAACGCTGGAGTTCACCGAATGTGGTTCATCTTGTCCACCCACGTGTcaaataaaaaagagaaactACATTTGTCCTCAGCGATGTCTGGACGGTTGTCGCTGTGGTAACGGAACAGTGTTTGATGGCCAGCGGTGTGTACCCGCACAGCAGTGCCCATGTCTTCACAACAAGAAACATTTCGCGCCAAACTCGGTTATCAAGAGAGACTGCAATAACTGCACATGTGCTAATGGCCGATGGATGTGTACTACCCTTCAATGTCCAGGCGTCTGTTCTGCTACCGGTGATCCTCACTACAGAACATTTGACGGACTGCAGTTCTCCTATATGGGTAAATGTCAATACATCTTGGCCAAGGACTGTGTCAATAATTCCTTCACTGTTTTCGTGGATAACGTGGAATGCGGCTCGGATGGCACAGTGTCCTGCACGAGAAACGTGTATATACATCTCAATGGAACGACTATCACACTTAGGGGAGGAGGAATAGTTCTTATTGATGGCATTAGAATGGCGAACTTCCCCAGTGTTGCAGAAAATTACATCATCAGGCAGCTGTCGTCATCGATGACGTCAGTACATAGTTCTGTTGGCATAAATGTCAAGTGGGATGGCATCTCGCGTGCTTACGTCACGGTACAGCCTCGCTTCCGTGGCATGACTTGCGGCCTGTGCGGAACTTTTAACAGCAATCAAAATGACGATTTGACCACCAAAGAGAACGTCGTAGAGAAGAGTATTACAGCCTTTGGAAATTCATGGAAGGTGAACTCAGTTTGTAATGACACACAGCCATCGAAGCATCCCTGCGAGGTGCAGATCCAAAGAAAGGCCACCGCAGAAAGGCTGTGTAACAGGCTACTTCATGCCCCTTTCACCAAGTGTCACCACTCGGTGGACCCTTCTGACGGGTATATCGCCAGTTGTATGTATGACGTATGTGGGTGTCAGCAAGGGACGCAGTGTCTGTGTAGTGCTATTGCTGCTTATGTACATGACTGCGCCAGACAGGGGGTTGTTATCGAATGGATGAATTCGAACATTATGCCGGAATGCAGTGCGGTTTGTTCTATTCAGGGACAGGTTTACCAAGTCTGTGGTTCCTCCTGCCAGCGGACGTGCCGCGAAATCTCCATGGACCTTCCTTGTCAAGAGGAATGTGCCGAGGGCTGTAACTGTCCAAAGGGCAGGGTCCTTAGAGAGGATAAGCAATGTGTACCCCACTCACAGTGCCCCTGTTATCATGATGGACGTGCTTATGATCCTGGGACTGTAATTAGACCAACTAGCTGCAATGAATGTTTGTGCAAGAATGGGCGGTTTCTCTGCACCAACAGAACatgtaaagTTTGTCCTCTAGGTCAAAAGTGGGTAAGCTGTGGCGCGCAATGCGCCAAGACCTGTGGCAATTTCCACCTGCCATGCCTGGAAATAAAGTGTCGGGAAGGTTGCGTCTGTCCCCAGGGTACGGTACTACTTGGTCAGCAGTGCGTAAACTCGTCCCAGTGCCTTTGCCATCACGGCGGTCACAGTTACAGGCCAGGACAACAGATTAAAGTGGACTGTAATACTTGTTCTTGCAAGGGAACGCAATGGTCGTGTACAAACCACGTCTGCCCCGGGACTTGTTCTGTTTATGGCGAACTAAATTACATCACCTTTGATGGCAGGAGGTTCACTTTCAGCGGGGCCTGTGAGTACCTTCTCGCACAGGACTCCTGTAATGGCTCCTCAAATGGTACCTTCCAAATACAGGCCCAGAACGTGCCTTGTGGAAGCAGTGGCCTGGCGTGCACAAAGAAAGTGACCATTACCATCAATAACACATTGATCGTATTAGAGCGAGAGAAAACTCCCGTGGTGTCGCCGCTGCCAGGTGCTGCAGGCTCAAACACGACAGCGATGTTTCAAATCAGGGAGCGTCATTTCTTTACTGTCTTAGAGACTGACCTGGGCTTAACAGTCACGTGGGATAAAGGAACACGGCTGTATATCACTTTGGAACCAAAGTTCAAAGGGCAAACTTGCGGTCTGTGCGGAAACTTTAATAACGACAGAAACGACGACTTCATGACTCCACAAATGTTAACAGAGACCTTAGCGAATGACTTCGGCGACAGCTGGAAAGTTGAACCAATGTGCCCGGATGCAGTAATTCCCACAAATCCTTGCACGACAAACAAGCACCGCGCACCGTGGGCTCACAAGATGTGCAGTGTCATTCGAAGAGATGTGTTTAAACCCTGCCACGAAGTTGTTGACCCAGATCCCTGGTACGATGCTTGCTACCGCGATGCTTGCGCGTGTGACAGCGGTGGTGATTGCGAGTGTCTGTGTACAGCAATTGCTTCGTATGGTCAGGAGTGCTGTAAGCATGGAGTACCAATCAAGTGGAGAACACAGGAACTTTGTCCAATTCAGTGTCCGCGTGAGGAAGGTAATTGCTTTGAGTACACCGCCTGCGAAACAGCCTGCCCCAAAACTTGTGGTAACCTGTGTGACGTCACTCCAGCTAGTTGCCCTATGCGATTTGAGGGATGTTCCTGCCCAAACGGCACAGTGCTGCATGATGGGAAATGCATTGTTCCTGGAAACTGCCCCTGTCACGTGGCAGGAGTCGACTACAAGCCGGGATCAATTATTGTAAAGAACTGTCAAAGATGTCGAGGAGCTCCAGCGGCAGAGACATCTAAGAATGTAGCTCCAAATGACGATTTACCACTGGttcaaccaccaccaccaccgcctaTGGATGACATCATCAATTAG

Transcript

BRAKERLUST00000026593

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q2PC93	SCO-spondin OS=Gallus gallus OX=9031 GN=SSPO PE=2 SV=1
P04275	von Willebrand factor OS=Homo sapiens OX=9606 GN=VWF PE=1 SV=4
Q28295	von Willebrand factor OS=Canis lupus familiaris OX=9615 GN=VWF PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000873 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01826 all species →	TIL	Trypsin Inhibitor like cysteine rich domain	Domain	Interproscan
PF00094 all species →	VWD	von Willebrand factor type D domain	Domain	Interproscan
PF08742 all species →	C8	C8 domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR050780 all species →	Family	Mucin/von Willebrand/Thrombospondin superfamily	Interproscan
IPR002919 all species →	Domain	Trypsin Inhibitor-like, cysteine rich domain	Interproscan
IPR036084 all species →	Homologous_superfamily	Serine protease inhibitor-like superfamily	Interproscan
IPR000742 all species →	Domain	EGF-like domain	Interproscan
IPR001846 all species →	Domain	von Willebrand factor, type D domain	Interproscan
IPR036508 all species →	Homologous_superfamily	Chitin binding domain superfamily	Interproscan
IPR014853 all species →	Domain	VWF/SSPO/Zonadhesin-like, cysteine-rich domain	Interproscan
IPR001007 all species →	Domain	VWFC domain	Interproscan
IPR011489 all species →	Domain	EMI domain	Interproscan
IPR002557 all species →	Domain	Chitin binding domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11339 all species →	EXTRACELLULAR MATRIX GLYCOPROTEIN RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005615 all species →	Cellular Component	extracellular space	Interproscan
GO:0031012 all species →	Cellular Component	extracellular matrix	Interproscan
GO:0008061 all species →	Molecular Function	chitin binding	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005576 all species →	Cellular Component	extracellular region	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERLUSP00000026593.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.