Gene detail

Detailed information of BRAKERLUSP00000027493.1 in Blastomussa wellsi

Genomic Location: not available for this species
NR annotation: XP_020609364.1, formin-like protein CG32138 isoform X2 [Orbicella faveolata]
Species Blastomussa wellsi · all data for this species · gene families

Sequence

CDS

BRAKERLUST00000027493

ATGGTGCAAGATCGAGTTAGGAATGCAAAAGCTAAGCgtaataaaaaaaagaagaacgGCGAAGTTCGAAAATCCAGGCTTAGTATGTTCGATTCAGTGAGATCGTCGTCGAGCGCTGTCTCAGTGTCTCAGAGTTCCTCTGGTGGCGACGATACTGAGTTTGATGTTGACGACGAATTACCTGACGATGAAGAAATCGAGCGAAGATTTTCCACTTTGTTGGAAAAGATGACACTACCTCCAGAAAGAGCGGCAGAACTTGCCAAAAGTCCAAAAGCTCACAAATGGAAAATGATTAAAGCGAAGGAATTGATGCAGCCAAAGTACTCTTCAGGTTTCTATATTGAACAGTTAAAGACCCACAGAGATATTGCACTCAACAAAACATTAAACAAGAAACTGCTGAAGGGACTGGAGCCTGTGGAGATGATATTGAGATCCCTGGAGGTTGACCTTCGAACACATCCAAACACCACCTGGTTACGTGAATTTATAGATGATCCCTACAGAGGCCACATTGCATTAATAGAATTCCTACAGTACCTTCACTTAAATCAGCCATTGCATGATGATGAGAATGTTccaaagaagaaaggaaaaccaGATGTTCTGGCCAGAGACTTTTATGGCTTTCTGTCAGTGATGAGTGTAGATGACTGCCTCAAATCCATCATCCTCTGTTTAAAAATTGACAGTTTAAAAACTCGAGCATTGGTTGTAAAGATGTTAACACAGGCCTGCCTGCAATCAGAGTATTATGACAAAGTTGTTGATGCAGTAAGGTTTTATACAAGAACATCAAGAGAGGGTCGGACATTTGAAACACTTATAAACCTGATGTACAAGAGACCTATATCACCACAATTTcagaCACTGTGTTTGACTTTATTCAACTCCTTAATTGGCATATCGCCAACATTTAACAAGAAGGTATTTCATCAACAAGAGATCGAAGATGCTGGATTCGATGTGGAACGCCTAGAAAGGACTCTGGAGGGTATGGAGGCTGGATCTGTACGGGAAGCTTTGAAAACATGGCAGGACAACTATATTCATGTGCAAGGTGTTATGGACGAGTTTGTTACTCTCAAAGAAAGAACCAAGTACCTGAGGGATGAGGTTGATCTTTTACAAACAAAACTTGAGCTTGATATGCGATCAGAAGAATACAGACTACGAGCCACAGAATTACAGACCACTTTAGAAAATGTTGTGAAACAAGTGAAGCACGAGGCAGACCAAGCTGAGTTACCCAATGAGCTCATTACCAGTGTAACCGAGGCTGCAGCAGCGGTGGCCCCACCCCCCATCCCTCCaccgccgccaccaccaccaccccttCCCCTGCAAGGACCAGATGGTACGCTAGTTCCTCCCCCACCACCTCCCCCTGAGTTGGATGGAACTCTATCGTTGAGACGCCATGGAGCTGCCAATAAAAGTCGACTTCCAATGTTGAACTGGACTCCTATGACGTCACAATCAAATGCCAGTGCATTCTTCAAGGGTATAAGCGATGAAGAAGTTGTGGGAGTGCTGGACTTCGTTGATTTTGATAGAAGGTTCGAGCTGAAAGTTAACGAAGCTTCAGAGGAACTTATTGCAAAGAAAGAACAAGGCAAGTGTTCATTGATCGCGCGTCGTCGCATACAGCACTCTACAGAAACCATTGGAAACCTGATTGATCAGTGTGATTTGGTAGAACTTCCGCCCGAGCATGCAGAGTTACTGCTCAAGTTTGTACCTACCAAGGAGGAGTTAGCAGGACTGGCTCAACATGCAGATCAATATTTGAAGCTGGCTGAGGCTGAACAGTTTCTGTTTGAGATTGCTAAAGTGGAGCGGTACGAGGCCAAACTCAGTGTGATGGCCTTTATTGGTGTGTTTGATGAACTCATGCGAACTGTTATGCCGCAAGTAGATGCTGTTCTGAGAGCGTCTACTTCCATTGTGAACAGTGGCAAGTTAAAAAAGCTTTTTCAGATTATACTGGTGTATGGAAACTACATGAATAGCAGCAGAAGAGGACTTGCCCATGGCTTCAAACTGGAATCTTTAAACAAGttggAAGACACTCGGACTACGGACAGAAAACAAACATTCCTTAGTTATATCGTGGAAATTGTACAGCAAAAGTTTCCGGATCTGCACGACTTCTCGGAGGAATTGTATCTTGACGGAGCAACTGCAGttTCTATGCAGACGCTAGCAGCCGATGTGCAAGGATTACGGAAAGGCCTGGACCTAACAAAGTCTGAGAGAGACAAACAACCAGATAACTTCATTATCTTTACGTTCTATAACGCAGCTTTCAAGAAAGTCCAGCGTATCACTGAGCGTTACCGTAAGATGGAGGAGGTTTATGCGCAAGTGTGCACTCTGTTCGGTGAAAACCCTCGAGTGGTTGAACCGTCAGACTTCTTCAAAACTTTCATTGACTTCATAGCCAGCTTCAAGAAAGCTCAGCGTGACTTGGAAGGAATGAAAGATTCACTGAAGAGCCGGACGCCCTGCAATGGCGAACCATCCAAGGCTCATATTCAAGTTGCCACTGCAGCCGCTAATGAGGGTCAGCGGAGATCCATGTATAACAAGAACAACCGATTTTGA

Transcript

BRAKERLUST00000027493

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O95466	Formin-like protein 1 OS=Homo sapiens OX=9606 GN=FMNL1 PE=1 SV=3
Q9JL26	Formin-like protein 1 OS=Mus musculus OX=10090 GN=Fmnl1 PE=1 SV=1
Q6NXC0	Formin-like protein 3 OS=Danio rerio OX=7955 GN=fmnl3 PE=2 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003245 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF06371 all species →	Drf_GBD	Diaphanous GTPase-binding Domain	Repeat	Interproscan
PF02181 all species →	FH2	Formin Homology 2 Domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011989 all species →	Homologous_superfamily	Armadillo-like helical	Interproscan
IPR010473 all species →	Domain	Formin, GTPase-binding domain	Interproscan
IPR014768 all species →	Domain	Rho GTPase-binding/formin homology 3 (GBD/FH3) domain	Interproscan
IPR015425 all species →	Domain	Formin, FH2 domain	Interproscan
IPR010472 all species →	Domain	Formin, FH3 domain	Interproscan
IPR043592 all species →	Family	Formin-like protein, animal	Interproscan
IPR042201 all species →	Homologous_superfamily	Formin, FH2 domain superfamily	Interproscan
IPR016024 all species →	Homologous_superfamily	Armadillo-type fold	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45857 all species →	FORMIN-LIKE PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003779 all species →	Molecular Function	actin binding	Interproscan
GO:0030036 all species →	Biological Process	actin cytoskeleton organization	Interproscan
GO:0031267 all species →	Molecular Function	small GTPase binding	Interproscan
GO:0016043 all species →	Biological Process	cellular component organization	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0007010 all species →	Biological Process	cytoskeleton organization	Interproscan
GO:0008360 all species →	Biological Process	regulation of cell shape	Interproscan
GO:0016477 all species →	Biological Process	cell migration	Interproscan
GO:0022604 all species →	Biological Process	regulation of cell morphogenesis	Interproscan
GO:0030866 all species →	Biological Process	cortical actin cytoskeleton organization	Interproscan
GO:0051015 all species →	Molecular Function	actin filament binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERLUSP00000027493.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.