Detailed information of BRAKERLUSP00000027957.1 in Blastomussa wellsi

Genomic Location: chr7:22949057...22959418
NR annotation: KAJ7340193.1, hypothetical protein OS493_002924 [Desmophyllum pertusum]
Species Blastomussa wellsi · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q3TEL6E3 ubiquitin ligase Rnf157 OS=Mus musculus OX=10090 GN=Rnf157 PE=1 SV=2
Q96PX1E3 ubiquitin ligase RNF157 OS=Homo sapiens OX=9606 GN=RNF157 PE=1 SV=3
Q5XIQ4E3 ubiquitin-protein ligase MGRN1 OS=Rattus norvegicus OX=10116 GN=Mgrn1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006794 (this species only) · gene tree & orthology
Ubiquitin familyE3|E3 activity RING|RING · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13920
all species →		zf-C3HC4_3Zinc finger, C3HC4 type (RING finger)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR045195
all species →		DomainLOG2-like, modified RING finger, C3HC5-typeInterproscan
IPR001841
all species →		DomainZinc finger, RING-typeInterproscan
IPR045194
all species →		FamilyE3 ubiquitin-protein ligase MGRN1/RNF157-likeInterproscan
IPR013083
all species →		Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22996
all species →		MAHOGUNINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0016567
all species →		Biological Processprotein ubiquitinationInterproscan
GO:0061630
all species →		Molecular Functionubiquitin protein ligase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K25192RNF157; E3 ubiquitin-protein ligase RNF157EC:2.3.2.27
Ubiquitin systemko04121deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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