Genomic Location: :...
NR annotation: XP_020619066.1, breast cancer type 2 susceptibility protein-like [Orbicella faveolata]
| CDS | |||||
| BRAKERLUST00000030122 | |||||
| Transcript |
| BRAKERLUST00000030122 |
| Protein |
| BRAKERLUSP00000030122.1 |
| Uniprot term | Description |
|---|---|
| P51587 | Breast cancer type 2 susceptibility protein OS=Homo sapiens OX=9606 GN=BRCA2 PE=1 SV=4 |
| Q864S8 | Breast cancer type 2 susceptibility protein homolog OS=Felis catus OX=9685 GN=BRCA2 PE=2 SV=2 |
| O35923 | Breast cancer type 2 susceptibility protein homolog OS=Rattus norvegicus OX=10116 GN=Brca2 PE=1 SV=1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF09169 | BRCA-2_helical | BRCA2, helical | Domain | Interproscan |
| PF09121 | Tower | Tower | Domain | Interproscan |
| PF09103 | BRCA-2_OB1 | BRCA2, oligonucleotide/oligosaccharide-binding, domain 1 | Domain | Interproscan |
| PF00634 | BRCA2 | BRCA2 repeat | Family | Interproscan |
| PF21318 | BRCA2DBD_OB2 | BRCA2, OB2 | Domain | Interproscan |
| PF09104 | BRCA-2_OB3 | BRCA2, oligonucleotide/oligosaccharide-binding, domain 3 | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR015252 | Domain | Breast cancer type 2 susceptibility protein, helical domain | Interproscan |
| IPR012340 | Homologous_superfamily | Nucleic acid-binding, OB-fold | Interproscan |
| IPR015525 | Family | Breast cancer type 2 susceptibility protein | Interproscan |
| IPR002093 | Repeat | BRCA2 repeat | Interproscan |
| IPR015205 | Domain | Tower domain | Interproscan |
| IPR015187 | Domain | BRCA2, OB1 | Interproscan |
| IPR015188 | Domain | BRCA2, OB3 | Interproscan |
| IPR036315 | Homologous_superfamily | BRCA2 helical domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11289 | BREAST CANCER TYPE 2 SUSCEPTIBILITY PROTEIN BRCA2 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000724 | Biological Process | double-strand break repair via homologous recombination | Interproscan |
| GO:0005634 | Cellular Component | nucleus | Interproscan |
| GO:0006281 | Biological Process | DNA repair | Interproscan |
| GO:0006355 | Biological Process | regulation of DNA-templated transcription | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K08775 | BRCA2, FANCD1; breast cancer 2 susceptibility protein | - | DNA repair and recombination proteins | ko03400 | deepkoala |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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