Gene detail

Detailed information of BRAKERLUSP00000031266.1 in Blastomussa wellsi

Genomic Location: chr8:20186772...20191118
NR annotation: XP_020624564.1, testican-2-like [Orbicella faveolata]
Species Blastomussa wellsi · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q92563	Testican-2 OS=Homo sapiens OX=9606 GN=SPOCK2 PE=1 SV=1
Q9ER58	Testican-2 OS=Mus musculus OX=10090 GN=Spock2 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007409 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF10591 all species →	SPARC_Ca_bdg	Secreted protein acidic and rich in cysteine Ca binding region	Domain	Interproscan
PF00086 all species →	Thyroglobulin_1	Thyroglobulin type-1 repeat	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000716 all species →	Domain	Thyroglobulin type-1	Interproscan
IPR019577 all species →	Domain	SPARC/Testican, calcium-binding domain	Interproscan
IPR036857 all species →	Homologous_superfamily	Thyroglobulin type-1 superfamily	Interproscan
IPR018247 all species →	Binding_site	EF-Hand 1, calcium-binding site	Interproscan
IPR011992 all species →	Homologous_superfamily	EF-hand domain pair	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13866 all species →	SPARC OSTEONECTIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005509 all species →	Molecular Function	calcium ion binding	Interproscan
GO:0005518 all species →	Molecular Function	collagen binding	Interproscan
GO:0005615 all species →	Cellular Component	extracellular space	Interproscan
GO:0048856 all species →	Biological Process	anatomical structure development	Interproscan
GO:0050840 all species →	Molecular Function	extracellular matrix binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K08136	SPOCK; testican	-	Proteoglycans	ko00535	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.