Gene detail

Detailed information of BRAKERLUSP00000031334.1 in Blastomussa wellsi

Genomic Location: not available for this species
NR annotation: RMX44793.1, hypothetical protein pdam_00016360 [Pocillopora damicornis]
Species Blastomussa wellsi · all data for this species · gene families

Sequence

CDS

BRAKERLUST00000031334

ATGGCGCCCCATTTAACAAGGCTTCTCGCTCTTTTCAGCGTCTTTTGTGTGCTGGCAACAACAGCTGGGACATTTGATATAACTGACGTCAAATCTTGGGCGAGTTCAGTGGGAACAAAGCTGTCTACATTTTTCAAAGATGCCACCCATTACAAGAAACTTCAAGAGGGTTATCAGCAATCGGCTCAACTCTCGCACACGAAGAAAGATGGTAGTGCCATAGCGAACATGATGAAAAGGAGCCTGGAGGCTGTTTTGCGGGAGAAAATAGAGTCCATCAAGAATCTTGCTGCAAAGACTGCAGAATTAAGACAGAATTATACGTATGACCCATCTCTCAAAGAAACTGGTTATTTTGATAGCAAGAAGTTGCAGGGCTTGGATCTTGAGAACGATCCTAGGTTTTCTACAGAAGTTAAAATTAACAAGTCTACCAGTGTTGTTCATATACCAACGGATGTTTTCAGTGGAGGAGTTGGTATTGTGAATACTATCAAGTGGACAAGTGGACTGGATAAATACTTCAAAGAGAATGAAAAGAATGACCCTTCATTGCTGtggcaatattttggaagttctGATGGCGTTTACAGAGTGTTCCCGGGTTTCAAGTGGGCTGATGATCCAAAACAAGATATATTTGACCACCGACGACGTGGCTGGTGCGAACAATTGCCTCTGATtgataaaaaaattcaacagttgtttattaatattttatattcTTGCCTCTTTAAACATGACAATCTTGTGCATGACTATCTCAAAATTTTCTATCTTGGTAGGTATATCCAAGGCTCAAGTTCGCCTAAAGACATAGTTTTAATACTGGACTTGAGTGGTAGCATGGCtggtgaaaaattggccattctTAAACTTGCTGCCTTGTCCTTACTTGAAACTCTGCAAGAAAATGACTATGTTAATATTGTTGCAGTGTCTCCAGATTGTAGAGAGGAACTGCTTCAAGCTACTGCACAGAATAAAAAGtATTTGCATCATTTTATTCCCAATAATGCTCATGCCAGAGGAATTGCTAAAGTCAGTGAAGGATTTAAATTAGCTATTGAAGTGCTGCAGGAATCAAGAGCAAAGAAGAATTTCTCATCTTCAAATTGCACACAAGCAGTCATTCTTTTTACAGATGGCATAGAAGACAGCCAAAGCAAATTTACCAAGGAAATCTTAGAATcaaaaaatgcagacaaaaagATCCGTGTTTTCACCTATCTTGTGGGAAGTGAAAGTGCAACAGACGAGGCATTAAAGGAAATTTCTAATGATTATAGAGGGTGCTTATTCAAGATTCAAACAATCTCAGATGTCAGGGAGAAGGTTCTGTCATATGTGTCCGTGCTCAGTCGGCCATTAGGCTTTGCACCCGGTGGCCCTGATCCTTCATGGACACCCATTTACTTGGATAAACTGGGGCTTGGCTTAATGAATACACTTGTGGCTCCAGTGTTCAATAAAACTGAAAATAGAGAACTACTGGGTGTTGTAGGAACAGATGTGGCCTTACCGCAGTTAGAAGACTCGGTCCCAGGAAGTGAGGTTGGTGTAAATGGCTATGGTTTTGCAATTAACAACAATGGTTTTGTACTGTTCCATCCAGGCCTTGATAAGAAGaAAGACCCACCCAACATTGCCCTCAATGAAGTGGAATACAATGGTAGTGAAGCCAAAAAGCTTATGCGTAACATGATTGACAGGTCAACTGGAAATTTGACATTTACAAACCGTTTACTATCTGAAGACAAGCAACGACTAGGCTTCAGTGAGAAATACCACTACTTTTACAGTCCTGTAATTAACACATCCTTTAGTGCTGCTGTTGCCATCCCAGAGTTTGGTCTGTACTCACTGGAGGCCCCTGGATTTACAGCCTCAAATAGTACAAAATATGTTAAGTTCTTATACAGCTCCAACAATGAAGATGTTATTGTTGCTCCTTGGAAAATCTGTGCACGTACCCCAGTAGCAGCTAAGAACACAACACCGGTATACCAGCCAGCTTATGCGAGTGCTACAGACATCATCAACGACCATCATCGTGACGAAAACTGTGATGAAAAAAAGCTAAACAATTTGCTTTTTGATGCAAATCTAACTCAGGAAGTAGCCAAAATGTGGAATGCAAATGATAATAAAAACAACAAAATTAATAGCGTATTTGTTGGAACACATGGAGGTATCATGAGATTGTTGACTTCAGGGTCAGCATCACCATTTACAAAACAGGATTATACTAAGGAACAGTTTTATAGACAAGCTGCGCAGTATGCTAGCAAAGGAAAGGACGTTATTGTTTTCTCTACACTGTACAGGAGTGAAAGTTACCAACCCGGGGTCAACGAGACTACTGTGGTCACTGCAAGTTCTCCTGTCGTTTACGAAGACAAAGTTGTTGCGGCAGTGGCTGGAATGCAATTTGACCAAGAAAAAATGAAGGAGACATTGCAAGAAGTCATCGCCAATACACGATCAAATTTAAGACATTTCCATTTTCTTGGGTTAAAGCATTGTTCCTGTCGACTTATCGATGACGATGGCTTCATACTGGCGACAAATCAACCGGATAATGCAGAGGTTGGTAAGTTTTTTGGCATATGGGAAGGAGCAGTGCTGAAGGAATTCATTAACCAGTCCCTGTTTGCAAAGCTGACATTTGACAACGTAGAAGGAGAATGCAAGAAGCCACGGCAGGACGCATCCAGTGCAAGGACGCTTCTGAATCCTCTATTTGCGGTGACATCTTACGTACAATTCTGGACCCAGACAGTTTTTTGGTCCCTAATGCAATTGAACATCTACAGTTTCTTCTCTCGTGGCAATGTTGCCTTGGCTGAGGAAGAAGAGAAGAAAATCCCATGTACACAACAATTGAAATTTTACAAAGGAGATTGGGAGAATCGAGCGACTGATCAACCTGAGGAGCTGAAATGTCCAGATTCCAGCTGTCCTTGGCTGGTCTACATGGCGGCAGTTAACGGCACCAATCTTCGACTGGTGGTGGTAAAGAGATCATCATCGTGCTCGTGCGAGGAGAATGAAAACATCAAACTTACAACTAAACCAGAGGATTTGCCCACTACTGCCAGCCCTAGGGCCTTGTCTTACAGGAAGCCGCCGGAACTCAAATCACGTTGTAATGACCAACAGGAGGAGAGTACTGGACGAGAGGATGTCATTAAGGTCCATTACAATTTTTGCACGCTAAAAGGAGAAGCCAGTCTAAAACAAGTGTTCTCAGAAGCCCGACCGCTGTTGAGTTCGCTGGAGACTGCAAGGGACTCGAAGGACCTGGGAATTGATTGA

Transcript

BRAKERLUST00000031334

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P54289	Voltage-dependent calcium channel subunit alpha-2/delta-1 OS=Homo sapiens OX=9606 GN=CACNA2D1 PE=1 SV=3
O08532	Voltage-dependent calcium channel subunit alpha-2/delta-1 OS=Mus musculus OX=10090 GN=Cacna2d1 PE=1 SV=1
P13806	Voltage-dependent calcium channel subunit alpha-2/delta-1 OS=Oryctolagus cuniculus OX=9986 GN=CACNA2D1 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000969 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08473 all species →	VGCC_alpha2	Neuronal voltage-dependent calcium channel alpha 2acd	Family	Interproscan
PF08399 all species →	VWA_N	VWA N-terminal	Family	Interproscan
PF00092 all species →	VWA	von Willebrand factor type A domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR051173 all species →	Family	Voltage-dependent calcium channel subunit alpha-2/delta	Interproscan
IPR013680 all species →	Domain	Voltage-dependent calcium channel, alpha-2/delta subunit, conserved region	Interproscan
IPR036465 all species →	Homologous_superfamily	von Willebrand factor A-like domain superfamily	Interproscan
IPR002035 all species →	Domain	von Willebrand factor, type A	Interproscan
IPR013608 all species →	Domain	VWA N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10166 all species →	VOLTAGE-DEPENDENT CALCIUM CHANNEL SUBUNIT ALPHA-2/DELTA-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005245 all species →	Molecular Function	voltage-gated calcium channel activity	Interproscan
GO:0005891 all species →	Cellular Component	voltage-gated calcium channel complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERLUSP00000031334.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.