Genomic Location: :...
NR annotation: XP_020606401.1, transcriptional regulator ATRX homolog [Orbicella faveolata]
| CDS | |||||
| BRAKERLUST00000031578 | |||||
| Transcript |
| BRAKERLUST00000031578 |
| Protein |
| BRAKERLUSP00000031578.1 |
| Uniprot term | Description |
|---|---|
| P46100 | Transcriptional regulator ATRX OS=Homo sapiens OX=9606 GN=ATRX PE=1 SV=6 |
| Q7YQM4 | Transcriptional regulator ATRX OS=Pan troglodytes OX=9598 GN=ATRX PE=2 SV=1 |
| Q7YQM3 | Transcriptional regulator ATRX OS=Pongo pygmaeus OX=9600 GN=ATRX PE=2 SV=1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF11107 | FANCF | Fanconi anemia group F protein (FANCF) | Repeat | Interproscan |
| PF17981 | ADD_ATRX | Cysteine Rich ADD domain | Domain | Interproscan |
| PF00271 | Helicase_C | Helicase conserved C-terminal domain | Domain | Interproscan |
| PF00176 | SNF2-rel_dom | SNF2-related domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR035428 | Family | Fanconi anemia group F protein | Interproscan |
| IPR038505 | Homologous_superfamily | FANCF, C-terminal domain superfamily | Interproscan |
| IPR027417 | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| IPR041430 | Domain | ATRX, ADD domain | Interproscan |
| IPR001650 | Domain | Helicase, C-terminal domain-like | Interproscan |
| IPR025766 | Domain | ADD domain | Interproscan |
| IPR014001 | Domain | Helicase superfamily 1/2, ATP-binding domain | Interproscan |
| IPR049730 | Domain | SNF2/RAD5-like, C-terminal helicase domain | Interproscan |
| IPR038718 | Homologous_superfamily | SNF2-like, N-terminal domain superfamily | Interproscan |
| IPR000330 | Domain | SNF2, N-terminal | Interproscan |
| IPR011011 | Homologous_superfamily | Zinc finger, FYVE/PHD-type | Interproscan |
| IPR044574 | Family | ATPase ARIP4-like | Interproscan |
| IPR013083 | Homologous_superfamily | Zinc finger, RING/FYVE/PHD-type | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR45797 | RAD54-LIKE | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0036297 | Biological Process | interstrand cross-link repair | Interproscan |
| GO:0043240 | Cellular Component | Fanconi anaemia nuclear complex | Interproscan |
| GO:0005524 | Molecular Function | ATP binding | Interproscan |
| GO:0140658 | Molecular Function | ATP-dependent chromatin remodeler activity | Interproscan |
| GO:0005634 | Cellular Component | nucleus | Interproscan |
| GO:0016887 | Molecular Function | ATP hydrolysis activity | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K10779 | ATRX; transcriptional regulator ATRX | - | Chromosome and associated proteins | ko03036 | deepkoala |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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