Gene detail

Detailed information of BRAKERLUSP00000031931.1 in Blastomussa wellsi

Genomic Location: not available for this species
NR annotation: XP_020613965.1, uncharacterized protein LOC110052179 [Orbicella faveolata]
Species Blastomussa wellsi · all data for this species · gene families

Sequence

CDS

BRAKERLUST00000031931

atgGCAGGTCCTGTGTGTGATTCTTCTGGCTTTAAGAATTTTACTGATGGCTGTCTTCTGGGTAGACAACAGCAGTTTGAGACCAGAAATTGGACTGCTCATTGTCATGCTGGTCGAGACTATAAGAGAAGCTCGTTTATTAAGAACTGTCCTTGTAGCAGAGATGATTTTCAATGTGACTATGGTtttgaaagaaagaattttGATGAAGAGTGTACTCCTATCAGTAGTGAAGACTTGGACAATGAAATTATACCTGAAACCTGTCCAGAGGGCTCAAATTATAACAGGACACAAGGATTCCGCAAAATTGATGGAGATTCATGTGAAGGGGGATCTGAGAAGGATTTCCTGCCAGTTTTAACGCCTTGTCCTATCAAAGAGCTAGGTAATTTAACCCTTAGAGGTGTAGGGAGCAACGTGACTAAGGATGGCAATGTCGCAGTTGAAACTGGGGGCACCGTGTCTTTCTTTGCTAATCTTACAAAAGGATATCAGCCAAATATCATGTATAGGTGGTTTTATGGTGATGGGCATGGCGACAAAGGAATGGGAGCACAATTTACCAGTGTTCAGCACCAGTATAAAAAGCCTGGGAAGTACATTGTGTCAGTTGTTGTATCTAATACTCAAAGTATTCTTGTGCAGAGATTAGATGTGTATGTTCAAGAAAAGCTAGCTGACGAAAGAGTGGTGATAAACTTCAATCCCAAAAGTCCTGGTGTGGATGAGGATGAAGAAGCTGGAGCCGTTTACTACAAATGGAAATATGATGATGGAGAAGTTAAAGGATGGCAGCCAGTTGCTACTCTTCAATTTCATAAAGCAAAGAGTTACATTGTTCAAATTACAGCAGCAAATTACCTGAACTCTGTAATGAAGTCTGTAAAAATCGAAGTCCTCAAAGACCTCACACCCTTCAATGTCACTGCTAGTGTTCTTGGGCCCACGGAGATTAAAGTTACATGGAAGTATTCTAGGGATGCTGACAAATTTATCAAAGGACACAGCATTTATAAGAGTACCTCAGGTAATGCTGGCTTCCAGCTGGCAAAATGTACTGTTGAAACAAGAACCTCATGTACACTGGGCAACCTATCTCCAGCTACAACTTACTACTTCAAGGTGTCGGCATATTCTACAGATACAGAGTCTGCATTTTCAAACATTGCATTTGTCACGACCAATACCAGCTCTCCTGGTGCACCAGAAAGTCTGCATGCATATCCGTTAAGTTCGTCAGCCATTAAAGTGGAATGGAAAGCTCCAGCAAACCCGAGTGGACGCATCACAAATTACACAATCCTTTATTGGTCACATGTTAAGTTGGCAATCCAGACTGTTAACAACAACCTTGCATTGTCAAGAAACTTTACAAACCTGCAGCAAGACACTGTCTATTTCTTTGAGGTGTATGCAAATAGTGACTCAGGCCGTAGCATAGCAGCAGGACCAGTCCAAGTGCTAACAAAGTTATCAAAACCAACTCTTCCACCACGAGACATAAAGAAAATCTCGGACAATGGTACATGCGCTCTACTACAGTGGAAGCCACCATTTCTTTCAAACTCAGACCAGAGGTCATTTCCGGCTAAGGGTTACAAAGTTAAAAGAACTGATGACAACAGCATTGATGATGTGCCAACAGCCTCTGATCTTGTTTGCAAGCTGACACCTGGGGCAGAGCATGTCTTCAGTGTTTGGGCTTACTCGGATGCTGGTCCTGGCCCTTCTGCCTCGATCACCATAACTACACAGATTATAAAGCCTGACGCACCTCAGAATGTAAAGGCCTTTGCAATATCATACCATCAAATAACCATTCAATGGGATCCCCCGAAACAGAGCAGTGGAACCCTGACTGGATATGAAATCTACCAGCGAAGCCCACCTAATGACAAGCCATATCCAGTCCCAGCTGATAAGACAGCTTACACTGTTAGCCAGCTTGATGCATACACCACATACAAGTTTGCTGTTTATGCTATAAACAGTCTGGGCCCAAGTGTGAAGAGCACTGTAGTCACAGCAACCACTCATGAAACCTCTCCTGGCATTGTGGAGTTTGTCACTACAGAAACTGTTCCACCTTATTCAGCGAGTATAAAAGTTACATGGTCTACTCCGTCAAAGCCAAATGGAGTCATCAAACAATACAAGgtCAAGTGGGGTAAAGCTTTCATTGACGATCTAACAAAAACTGATGGTTTTAAGTTTGAGACAGTAGATGGCTCAACCACCGCATACACATTCAAGCATCTATTCAGTGACACTTACTATTCCTTTATTGTGATTCCTGTGAATGGTGCTGGGGAGGCCTTGCAGCACATAAGTCCAAAGAAGCAACGGACAGGAACAGCTTTAAAGGGCACGGAACGACTCAGCATGGTCTATGAAGGCCCCATAATGGATGGTGAAGAGGCTTCAAAAGACTTTATCCCTAACTTCATTAAAGTTGCCAGTACGAATGCCAAAATTTTAGAGGATCGCATTGCTGCTATTAAAGTTGAGAGAAACAGTGGACTAACAGAACAGGGAAAAGTTCTGTTTGATCTTATCCCTCCGCTTAATCGCTCTGGTGTTTCTATGGGAAAGGCTAAATCAGCTCTCAACAAAGGGTTCAAAGCAAGTTCCTGGACTCTAACCAGTGGTTCCTTAAGGAGTGTTTCTGGAGAAGTCATTCCAACTCCATCAGTTGGCAAGCCATCAGTCGGGGCTCAGAAAGGTGGCTCACCAGATGACGGCAGTCAAAAGAAGACACTGGTTGTTGCTATACCCCTCGCAATAATAGGAATAGCTTTGTTTTGTGGGATGATATTTTTTTACATGAAATACAAATCCCTCGAGAAGCAATACAGGAAAATGAATGACAAAGACCACGAGGAGGACGAGATGAAGGTCGTATATCACGAGGACATGCAAGCAGACTCCCCTGACGTCATTTTTAGCGAGCAATCACGAAAAGGAAGGAGCAAGGTGTACCGAGATTCAGAGAAAGTTCCTCTTGGTGAAAGCGATGAACTAACCATGATATAA

Transcript

BRAKERLUST00000031931

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q92673	Sortilin-related receptor OS=Homo sapiens OX=9606 GN=SORL1 PE=1 SV=2
Q9UMZ3	Phosphatidylinositol phosphatase PTPRQ OS=Homo sapiens OX=9606 GN=PTPRQ PE=1 SV=2
O88307	Sortilin-related receptor OS=Mus musculus OX=10090 GN=Sorl1 PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000636 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF15901 all species →	Sortilin_C	Sortilin, neurotensin receptor 3, C-terminal	Domain	Interproscan
PF18911 all species →	PKD_4	PKD domain	Domain	Interproscan
PF00041 all species →	fn3	Fibronectin type III domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003529 all species →	Conserved_site	Long hematopoietin receptor, Gp130 family 2, conserved site	Interproscan
IPR003961 all species →	Domain	Fibronectin type III	Interproscan
IPR036116 all species →	Homologous_superfamily	Fibronectin type III superfamily	Interproscan
IPR050713 all species →	Family	Receptor-type Tyrosine-protein Phosphatases/Ushers	Interproscan
IPR031777 all species →	Domain	Sortilin, C-terminal	Interproscan
IPR013783 all species →	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR035986 all species →	Homologous_superfamily	PKD domain superfamily	Interproscan
IPR000601 all species →	Domain	PKD domain	Interproscan
IPR022409 all species →	Domain	PKD/Chitinase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46957 all species →	CYTOKINE RECEPTOR	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004896 all species →	Molecular Function	cytokine receptor activity	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K06777	PTPRD; receptor-type tyrosine-protein phosphatase delta	EC:3.1.3.48	Protein phosphatases and associated proteins	ko01009	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.